CABS-dock: b4a4893d48d5992

Project name: b4a4893d48d5992

Status: done

submitted: 2026-05-04 11:12:33, status changed: 2026-05-04 14:45:28

Project settings

Protein sequence(s)	HMVHITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFLLSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFFSPGFNDGGKNTAPLTLCPL input pdb
Peptide sequence	MHEALHNH
Simulation mc cycles	50
Peptide secondary structure psipred	CCHHHCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	39.6625	4.03404	10.8051	160
cluster_2.pdb ( medoid)	38.4493	3.56313	19.9346	137
cluster_3.pdb ( medoid)	34.4968	5.94258	24.8098	205
cluster_4.pdb ( medoid)	22.7624	3.11917	10.4988	71
cluster_5.pdb ( medoid)	18.7328	4.2172	23.8508	79
cluster_6.pdb ( medoid)	16.5038	5.87744	23.1982	97
cluster_7.pdb ( medoid)	9.4419	9.95562	25.6917	94
cluster_8.pdb ( medoid)	7.63094	11.9251	30.1655	91
cluster_9.pdb ( medoid)	2.83261	16.2394	37.8414	46
cluster_10.pdb ( medoid)	1.22296	16.3538	34.3097	20