CABS-dock: b5538156335a3c4

Project name: b5538156335a3c4

Status: done

submitted: 2026-01-22 13:19:57, status changed: 2026-01-22 15:01:51

Project settings

Protein sequence(s)	GTVFTTVEDLLGSKILLTCSLDDSTEVTGHRWLKGGVVLKEDALPGQKTEFKVDSSDDQWGEYSCVFLPEPMGTANIQLHG input pdb
Peptide sequence	MATPSPTTTSVPEDEKVEES
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCHHHHCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	20.1678	6.99133	15.396	141
cluster_2.pdb ( medoid)	17.2185	7.20154	25.6107	124
cluster_3.pdb ( medoid)	16.2118	6.7235	13.5981	109
cluster_4.pdb ( medoid)	15.7555	8.82233	20.6339	139
cluster_5.pdb ( medoid)	14.3861	6.18654	14.69	89
cluster_6.pdb ( medoid)	12.6684	7.42004	13.9673	94
cluster_7.pdb ( medoid)	11.9697	7.01773	24.2014	84
cluster_8.pdb ( medoid)	9.35211	8.66115	20.5136	81
cluster_9.pdb ( medoid)	7.65082	9.93357	23.9077	76
cluster_10.pdb ( medoid)	7.15556	8.80434	18.6917	63