Project name: b5714e075020ea2

Status: done

submitted: 2023-11-29 04:49:51, status changed: 2023-11-29 18:56:50

Project settings
Peptide sequence FPPPKVIQ
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 41.4566 3.18405 16.6708 132
cluster_2.pdb ( medoid) 35.5038 4.53472 25.9108 161
cluster_3.pdb ( medoid) 14.1964 6.76228 32.7406 96
cluster_4.pdb ( medoid) 13.6204 11.8205 34.6208 161
cluster_5.pdb ( medoid) 12.7483 7.60884 35.5914 97
cluster_6.pdb ( medoid) 12.4754 10.18 47.798 127
cluster_7.pdb ( medoid) 11.6978 5.64207 12.5211 66
cluster_8.pdb ( medoid) 4.58071 12.6618 34.2914 58
cluster_9.pdb ( medoid) 3.28436 18.2684 42.0446 60
cluster_10.pdb ( medoid) 2.55712 16.4247 43.7597 42