CABS-dock: b5e7d652dae7fb0

Project name: b5e7d652dae7fb0

Status: done

submitted: 2026-01-22 13:27:03, status changed: 2026-01-22 14:04:11

Project settings

Protein sequence(s)	PEITLIIFGVIAGVIGTILLISYGIRRL input pdb
Peptide sequence	AAREEVPGRRGYPGY
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	23.2459	5.76447	19.7801	134
cluster_2.pdb ( medoid)	19.1137	5.44111	19.5668	104
cluster_3.pdb ( medoid)	18.0278	5.82435	15.0509	105
cluster_4.pdb ( medoid)	16.2692	6.63832	17.2791	108
cluster_5.pdb ( medoid)	15.957	7.70823	19.2412	123
cluster_6.pdb ( medoid)	15.3195	7.44147	22.4588	114
cluster_7.pdb ( medoid)	14.3516	6.20138	22.5241	89
cluster_8.pdb ( medoid)	7.38962	15.0211	29.6266	111
cluster_9.pdb ( medoid)	5.56661	9.7007	19.4159	54
cluster_10.pdb ( medoid)	5.20265	11.1482	21.3084	58