Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | GIPCGESCVWIPCISAALGCSCKNKVCYRN |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCEEEHHCHHHHHCCCCCCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 114.185 | 0.875769 | 2.06462 | 100 |
cluster_2.pdb ( medoid) | 33.7633 | 2.9618 | 6.19653 | 100 |
cluster_3.pdb ( medoid) | 21.8114 | 4.58475 | 8.2721 | 100 |
cluster_4.pdb ( medoid) | 16.1279 | 4.1543 | 7.13072 | 67 |
cluster_5.pdb ( medoid) | 15.8827 | 6.548 | 23.2506 | 104 |
cluster_6.pdb ( medoid) | 11.8996 | 8.57168 | 31.0805 | 102 |
cluster_7.pdb ( medoid) | 11.6777 | 8.47766 | 20.0158 | 99 |
cluster_8.pdb ( medoid) | 9.05409 | 13.8059 | 28.8406 | 125 |
cluster_9.pdb ( medoid) | 5.84818 | 5.1298 | 17.1488 | 30 |
cluster_10.pdb ( medoid) | 5.35745 | 13.6259 | 32.9731 | 73 |