CABS-dock: ACAHWSGNCCFWK

Project name: ACAHWSGNCCFWK

Status: done

submitted: 2026-02-17 15:03:34, status changed: 2026-02-18 09:00:53

Project settings

Protein sequence(s)	QPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGARSSEKEEREREEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARHYYYYYGMDVWGQGTTVTVSSWSASAPTLFPLVSCVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVTDEHVVCKVQHPNGNKEKNVPLPSVTHVFGSGTQLTVLSQPKATPSVTLFPPSSEELQANKATLVCLMNDFYPGILTVTWKADGTPITQGVEMTTPSKQSNNKYAASSYLSLTPEQWRSRRSYSCQVMHEGSTVEKTVAP input pdb
Peptide sequence	ACAHWSGNCCFWK
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	20.6024	5.92163	49.9354	122
cluster_2.pdb ( medoid)	19.2048	6.66501	44.1617	128
cluster_3.pdb ( medoid)	18.9485	5.91076	26.501	112
cluster_4.pdb ( medoid)	15.3339	16.7602	46.2578	257
cluster_5.pdb ( medoid)	14.1092	10.1352	26.131	143
cluster_6.pdb ( medoid)	5.81389	10.1481	32.9739	59
cluster_7.pdb ( medoid)	3.54699	15.2242	30.3891	54
cluster_8.pdb ( medoid)	3.48775	20.3569	40.5483	71
cluster_9.pdb ( medoid)	2.84324	5.62738	11.6683	16
cluster_10.pdb ( medoid)	2.18245	17.4116	40.8301	38