Protein sequence(s) | TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF input pdb | |||||||
Peptide sequence | SSGIQARKNLFNNQG | |||||||
Simulation mc cycles | 50 | |||||||
Peptide secondary structure psipred | CCCHHHHHHHHCCCC | |||||||
Contact information |
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Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 31.8159 | 4.24317 | 17.3001 | 135 |
cluster_2.pdb ( medoid) | 29.4821 | 3.39188 | 10.9126 | 100 |
cluster_3.pdb ( medoid) | 22.1367 | 7.7699 | 17.3388 | 172 |
cluster_4.pdb ( medoid) | 16.1022 | 4.28513 | 19.8669 | 69 |
cluster_5.pdb ( medoid) | 14.0135 | 9.13403 | 19.7554 | 128 |
cluster_6.pdb ( medoid) | 13.0314 | 5.06468 | 15.4184 | 66 |
cluster_7.pdb ( medoid) | 11.9486 | 5.60733 | 12.3094 | 67 |
cluster_8.pdb ( medoid) | 11.0862 | 11.7263 | 21.5696 | 130 |
cluster_9.pdb ( medoid) | 9.35769 | 8.44225 | 22.3022 | 79 |
cluster_10.pdb ( medoid) | 4.1539 | 8.18507 | 23.2317 | 34 |