CABS-dock: c385141b80542a

Project name: c385141b80542a

Status: done

submitted: 2026-06-03 02:12:48, status changed: 2026-06-03 13:05:20

Project settings

Protein sequence(s)	MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC input pdb
Peptide sequence	DAEALAAIRARALARS
Simulation mc cycles	50
Peptide secondary structure psipred	CHHHHHHHHHHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	73.7985	1.6938	5.31574	125
cluster_2.pdb ( medoid)	15.7021	13.0556	37.2706	205
cluster_3.pdb ( medoid)	15.3457	6.4513	47.4328	99
cluster_4.pdb ( medoid)	13.8549	3.10359	20.139	43
cluster_5.pdb ( medoid)	11.169	7.52079	33.341	84
cluster_6.pdb ( medoid)	10.584	7.46409	32.879	79
cluster_7.pdb ( medoid)	10.4881	12.7764	36.5404	134
cluster_8.pdb ( medoid)	9.36863	13.5559	38.4951	127
cluster_9.pdb ( medoid)	7.27439	7.97318	32.2773	58
cluster_10.pdb ( medoid)	3.67942	12.502	32.723	46