CABS-dock: c63bd579705d3c0

Project name: c63bd579705d3c0

Status: done

submitted: 2026-01-23 11:45:19, status changed: 2026-01-23 21:35:09

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	DGIHVKAKNAQEVTIDNVHAQNVGE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCEEEEECCEECCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	34.1793	3.01352	17.9878	103
cluster_2.pdb ( medoid)	29.0579	3.44141	7.94673	100
cluster_3.pdb ( medoid)	25.1048	4.06297	24.9299	102
cluster_4.pdb ( medoid)	24.3902	4.26401	15.8577	104
cluster_5.pdb ( medoid)	14.0879	7.5242	27.2822	106
cluster_6.pdb ( medoid)	11.8124	10.1589	49.7941	120
cluster_7.pdb ( medoid)	11.7957	10.5123	30.2126	124
cluster_8.pdb ( medoid)	7.82302	11.121	23.4118	87
cluster_9.pdb ( medoid)	4.43531	13.9787	31.8364	62
cluster_10.pdb ( medoid)	4.12662	22.2942	52.8645	92