Protein sequence(s) | ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVV input pdb |
Peptide sequence | LQEEDAGEYGCMVDGAR |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCHHHHHCCCCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 23.35 | 6.42397 | 22.6568 | 150 |
cluster_2.pdb ( medoid) | 20.5406 | 5.54999 | 23.3098 | 114 |
cluster_3.pdb ( medoid) | 17.8915 | 6.87479 | 20.4424 | 123 |
cluster_4.pdb ( medoid) | 12.4092 | 8.94496 | 23.9534 | 111 |
cluster_5.pdb ( medoid) | 11.3795 | 5.97566 | 11.5152 | 68 |
cluster_6.pdb ( medoid) | 10.5756 | 8.9829 | 22.3098 | 95 |
cluster_7.pdb ( medoid) | 9.24244 | 13.741 | 30.4064 | 127 |
cluster_8.pdb ( medoid) | 8.32235 | 13.3376 | 28.1996 | 111 |
cluster_9.pdb ( medoid) | 7.79884 | 6.9241 | 12.0298 | 54 |
cluster_10.pdb ( medoid) | 6.88749 | 6.82397 | 15.1937 | 47 |