Project name: 11_SRC_RUTU

Status: done

submitted: 2023-11-27 16:06:45, status changed: 2023-11-28 00:16:21

Project settings
Peptide sequence RLWLRLLLGY
Simulation mc cycles50
Peptide secondary structure psipred CCHHHHHCCC
Contact information
273:A 295:A 340:A 341:A 404:A
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 39.8646 5.11733 25.235 204
cluster_2.pdb ( medoid) 25.3824 4.72768 39.4552 120
cluster_3.pdb ( medoid) 25.1053 4.62054 28.9411 116
cluster_4.pdb ( medoid) 20.6851 3.77083 27.4347 78
cluster_5.pdb ( medoid) 18.0454 6.81615 35.0729 123
cluster_6.pdb ( medoid) 10.1568 7.28578 33.6093 74
cluster_7.pdb ( medoid) 8.9629 8.92569 29.0826 80
cluster_8.pdb ( medoid) 8.71769 7.45611 30.8408 65
cluster_9.pdb ( medoid) 7.61091 11.2996 44.1169 86
cluster_10.pdb ( medoid) 4.98954 10.8226 34.4177 54