CABS-dock: d3119e05977c10

Project name: d3119e05977c10

Status: done

submitted: 2026-01-14 16:47:18, status changed: 2026-01-15 04:06:43

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	DEHQKPLFELAEGAVLKNVNLGENE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCHHHHHCCCEEECCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	46.5594	2.1478	5.33924	100
cluster_2.pdb ( medoid)	39.0568	2.56038	6.34489	100
cluster_3.pdb ( medoid)	14.8637	4.64219	12.8276	69
cluster_4.pdb ( medoid)	10.684	5.33508	9.86823	57
cluster_5.pdb ( medoid)	7.62386	9.70637	25.7855	74
cluster_6.pdb ( medoid)	7.3291	10.6425	26.1594	78
cluster_7.pdb ( medoid)	7.11682	4.35588	6.81963	31
cluster_8.pdb ( medoid)	6.07621	4.11441	6.84609	25
cluster_9.pdb ( medoid)	2.89928	11.3821	21.0059	33
cluster_10.pdb ( medoid)	2.79761	11.7958	23.925	33