Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | GLPVCGETCVGGTCNTPGCTCSWPVCTRN |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCCEECCCCCCCCCCEECCEEECC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 30.6214 | 3.42898 | 29.494 | 105 |
cluster_2.pdb ( medoid) | 18.3261 | 6.49347 | 26.4859 | 119 |
cluster_3.pdb ( medoid) | 16.0587 | 11.3957 | 27.1928 | 183 |
cluster_4.pdb ( medoid) | 15.8139 | 7.39857 | 24.055 | 117 |
cluster_5.pdb ( medoid) | 12.8121 | 7.10269 | 25.9324 | 91 |
cluster_6.pdb ( medoid) | 12.8081 | 6.79257 | 27.8855 | 87 |
cluster_7.pdb ( medoid) | 10.7432 | 5.95726 | 27.4948 | 64 |
cluster_8.pdb ( medoid) | 10.2661 | 3.70149 | 5.72272 | 38 |
cluster_9.pdb ( medoid) | 7.14414 | 6.85877 | 19.996 | 49 |
cluster_10.pdb ( medoid) | 3.60168 | 13.0495 | 28.544 | 47 |