CABS-dock: d95d032d0ad9fc6

Project name: d95d032d0ad9fc6

Status: done

submitted: 2026-01-23 12:01:24, status changed: 2026-01-23 21:47:09

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	TFTADKSMGNGDQGENQKPMFELAE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCCCCCCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	39.7261	2.66827	21.4202	106
cluster_2.pdb ( medoid)	16.8744	10.43	30.6209	176
cluster_3.pdb ( medoid)	13.7613	7.63008	21.4887	105
cluster_4.pdb ( medoid)	13.3239	6.52961	32.9271	87
cluster_5.pdb ( medoid)	12.9867	9.93323	27.6142	129
cluster_6.pdb ( medoid)	7.39212	8.25203	22.3452	61
cluster_7.pdb ( medoid)	5.32031	8.2702	15.139	44
cluster_8.pdb ( medoid)	5.09504	16.0941	32.0364	82
cluster_9.pdb ( medoid)	4.91679	2.23723	2.9551	11
cluster_10.pdb ( medoid)	1.24573	22.4769	42.8482	28