Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | VKSTGRADDDLAVKTKYLPP |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCCCCCCCCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 35.4287 | 2.82257 | 7.11123 | 100 |
cluster_2.pdb ( medoid) | 34.6117 | 3.72707 | 11.5376 | 129 |
cluster_3.pdb ( medoid) | 30.6984 | 6.05894 | 12.2625 | 186 |
cluster_4.pdb ( medoid) | 28.9746 | 3.96899 | 13.2728 | 115 |
cluster_5.pdb ( medoid) | 26.1813 | 4.01049 | 16.6437 | 105 |
cluster_6.pdb ( medoid) | 16.0161 | 6.24372 | 17.9702 | 100 |
cluster_7.pdb ( medoid) | 14.6307 | 7.38175 | 33.5711 | 108 |
cluster_8.pdb ( medoid) | 12.3744 | 5.57604 | 10.3183 | 69 |
cluster_9.pdb ( medoid) | 6.29534 | 8.73662 | 25.9759 | 55 |
cluster_10.pdb ( medoid) | 3.25786 | 10.1293 | 21.4936 | 33 |