CABS-dock: wkz81

Project name: wkz81_13

Status: done

submitted: 2026-01-14 10:29:28, status changed: 2026-01-15 03:35:20

Project settings

Protein sequence(s)	STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ input pdb
Peptide sequence	KVQKELATDEEIKEALLEYLRKRFS
Simulation mc cycles	50
Peptide secondary structure psipred	CCHHHHCCHHHHHHHHHHHHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	16.9422	6.5517	37.8246	111
cluster_2.pdb ( medoid)	12.9076	6.43033	28.4288	83
cluster_3.pdb ( medoid)	7.93946	9.06863	29.3038	72
cluster_4.pdb ( medoid)	7.36491	8.82563	29.6259	65
cluster_5.pdb ( medoid)	6.81584	18.3396	37.4528	125
cluster_6.pdb ( medoid)	6.12156	15.6823	40.9556	96
cluster_7.pdb ( medoid)	5.9049	11.8546	32.5088	70
cluster_8.pdb ( medoid)	4.78398	11.0787	34.3444	53
cluster_9.pdb ( medoid)	3.86481	18.1122	38.5869	70
cluster_10.pdb ( medoid)	2.85004	19.2979	37.4711	55