Protein sequence(s) | ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVV input pdb |
Peptide sequence | LQVTDSGLYRCVIYHPP |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCEEEEEEECCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 23.9251 | 2.71682 | 18.6087 | 65 |
cluster_2.pdb ( medoid) | 16.8985 | 9.52746 | 26.4312 | 161 |
cluster_3.pdb ( medoid) | 16.1528 | 9.65775 | 34.585 | 156 |
cluster_4.pdb ( medoid) | 15.6976 | 2.42075 | 13.877 | 38 |
cluster_5.pdb ( medoid) | 11.8879 | 8.15955 | 25.7158 | 97 |
cluster_6.pdb ( medoid) | 10.9374 | 13.4401 | 30.3659 | 147 |
cluster_7.pdb ( medoid) | 10.2883 | 10.9834 | 25.4591 | 113 |
cluster_8.pdb ( medoid) | 9.11007 | 9.76941 | 23.6898 | 89 |
cluster_9.pdb ( medoid) | 5.64621 | 12.3977 | 25.5117 | 70 |
cluster_10.pdb ( medoid) | 5.12312 | 12.4924 | 23.7549 | 64 |