CABS-dock: ee9c61c082bfb50

Project name: ee9c61c082bfb50

Status: done

submitted: 2026-01-22 13:01:22, status changed: 2026-01-22 13:45:43

Project settings

Protein sequence(s)	PEITLIIFGVIAGVIGTILLISYGIRRL input pdb
Peptide sequence	HANTAEIAESYDNRRL
Simulation mc cycles	50
Peptide secondary structure psipred	CCCHHHHHHHHHCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	22.0146	6.08686	23.0496	134
cluster_2.pdb ( medoid)	21.3808	6.73502	26.0725	144
cluster_3.pdb ( medoid)	16.4654	7.40947	24.4913	122
cluster_4.pdb ( medoid)	15.5677	6.23084	17.8892	97
cluster_5.pdb ( medoid)	11.0179	10.1653	25.383	112
cluster_6.pdb ( medoid)	10.2539	11.7029	29.7991	120
cluster_7.pdb ( medoid)	7.01862	11.3982	23.3662	80
cluster_8.pdb ( medoid)	6.56965	11.8728	30.9388	78
cluster_9.pdb ( medoid)	6.27064	10.0468	21.5669	63
cluster_10.pdb ( medoid)	4.44341	11.2526	26.5578	50