CABS-dock: eec3cda080a63fc

Project name: eec3cda080a63fc

Status: done

submitted: 2026-01-13 15:34:20, status changed: 2026-01-13 22:59:59

Project settings

Protein sequence(s)	SLSTIICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVGPNGAIVTSLNLFSTKIDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITESFASSFPTVIAYIVDTPRASSPTTFMSNMLYACSILYKTKLPMIVVFNKTDVCKADFAKEWMTDFESFQAAIKEDQDGYMSSLVNSMSLMLEEFYSQLDVVGVSSFTGDGFDEFMQCVDKKVDEYDQYYKKHHHH input pdb
Peptide sequence	KNTMQYLTNFSRFRD
Simulation mc cycles	50
Peptide secondary structure psipred	CCCHHHHHCHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	43.8493	1.73321	12.6611	76
cluster_2.pdb ( medoid)	41.3392	4.59612	17.5445	190
cluster_3.pdb ( medoid)	30.8042	4.31759	7.85108	133
cluster_4.pdb ( medoid)	29.7562	5.54506	15.4906	165
cluster_5.pdb ( medoid)	22.5148	2.08751	6.56047	47
cluster_6.pdb ( medoid)	19.4996	2.56415	24.6236	50
cluster_7.pdb ( medoid)	19.2112	2.91497	6.63968	56
cluster_8.pdb ( medoid)	18.9739	4.90148	11.0758	93
cluster_9.pdb ( medoid)	15.2437	5.64168	17.3912	86
cluster_10.pdb ( medoid)	8.34407	12.4639	38.4375	104