Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | GIPCAESCVWIPCTVTALVGCSCSDKVCYN |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCCEEEEECHHHHHCCCCCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 29.7239 | 4.03716 | 26.0314 | 120 |
cluster_2.pdb ( medoid) | 21.2105 | 5.94044 | 17.0316 | 126 |
cluster_3.pdb ( medoid) | 19.7276 | 5.01836 | 18.7678 | 99 |
cluster_4.pdb ( medoid) | 15.654 | 7.66577 | 19.3543 | 120 |
cluster_5.pdb ( medoid) | 13.3843 | 8.06914 | 29.4638 | 108 |
cluster_6.pdb ( medoid) | 12.2798 | 6.51475 | 19.6448 | 80 |
cluster_7.pdb ( medoid) | 7.43267 | 8.47609 | 21.6664 | 63 |
cluster_8.pdb ( medoid) | 6.60854 | 10.5924 | 29.9678 | 70 |
cluster_9.pdb ( medoid) | 6.52898 | 11.4872 | 37.5336 | 75 |
cluster_10.pdb ( medoid) | 3.16377 | 19.5969 | 46.3993 | 62 |