CABS-dock: f7b1d99ea61f0d3

Project name: f7b1d99ea61f0d3

Status: done

submitted: 2026-01-19 13:16:53, status changed: 2026-01-20 00:09:23

Project settings

Protein sequence(s)	GQHQPREDCKLKCGNVTIEYPFGISTGCYYPGDDNFNLTCVVEEKLLLFGIIQVTNISHSGHVSVLFERFSECYEQKNETNGTALGYQLGSSFSLSSNNKFTLVGCNALSLLSTFGKQNYSTGCLSLCNSQPEANGRCNGVGCCTTEDFSVPFDSDTFQFGSVRLRNQVNNSLDLFNTSVYQFNPCTYAFLVEDGKFNFDSSKDLKNLRNVTRFPVALDWSIGNQTCEQAGSTRICGKNSSCYNSTTRNGYICKCNEGYDGNPYRSEGCKDIDECISDTHNCSDPKTCRNRDGGFDCKCPSGYDLNSSMSCTRPEYKRTR input pdb
Peptide sequence	KDVNFGTPDSTVQNPQDASKPNDSQ
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCHHHCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	117.682	0.849747	3.14338	100
cluster_2.pdb ( medoid)	17.4887	6.28976	15.8176	110
cluster_3.pdb ( medoid)	15.2659	6.81256	26.8454	104
cluster_4.pdb ( medoid)	12.6577	4.26619	9.88471	54
cluster_5.pdb ( medoid)	11.0389	7.33769	25.6683	81
cluster_6.pdb ( medoid)	8.09434	12.7249	25.5168	103
cluster_7.pdb ( medoid)	4.8525	8.65534	17.6372	42
cluster_8.pdb ( medoid)	4.54047	6.60724	16.2555	30
cluster_9.pdb ( medoid)	1.79411	11.1476	19.3419	20
cluster_10.pdb ( medoid)	1.4591	15.7631	31.0708	23