CABS-dock: f7d33a042117a41

Project name: f7d33a042117a41

Status: done

submitted: 2026-01-23 11:53:30, status changed: 2026-01-23 22:11:05

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	MSIGITPRPQQTTTPLDFSALSGKS
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCHHHHCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	55.7156	1.84868	17.5287	103
cluster_2.pdb ( medoid)	28.6269	3.52815	6.7739	101
cluster_3.pdb ( medoid)	23.1492	3.41264	17.2012	79
cluster_4.pdb ( medoid)	19.0877	5.34375	31.8761	102
cluster_5.pdb ( medoid)	16.0969	6.27451	18.6449	101
cluster_6.pdb ( medoid)	12.0304	8.4785	19.6224	102
cluster_7.pdb ( medoid)	10.8101	12.3958	37.6551	134
cluster_8.pdb ( medoid)	10.1278	7.01039	22.0878	71
cluster_9.pdb ( medoid)	8.07897	9.15958	19.5217	74
cluster_10.pdb ( medoid)	4.8301	6.83215	19.3959	33