CABS-dock: fb7156c8cef138e

Project name: fb7156c8cef138e

Status: done

submitted: 2026-01-22 13:04:15, status changed: 2026-01-22 19:36:02

Project settings

Protein sequence(s)	VYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHLTFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTRPSQPLLPQHSSLETQLFCEEKIPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQSS input pdb
Peptide sequence	HANTAEIAESYDNRRL
Simulation mc cycles	50
Peptide secondary structure psipred	CCCHHHHHHHHHCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	25.3951	6.89108	20.4419	175
cluster_2.pdb ( medoid)	24.6563	5.51584	25.0632	136
cluster_3.pdb ( medoid)	19.0128	3.83952	10.137	73
cluster_4.pdb ( medoid)	17.5892	7.67514	19.9805	135
cluster_5.pdb ( medoid)	16.5844	10.4918	25.404	174
cluster_6.pdb ( medoid)	12.3003	5.44703	11.7751	67
cluster_7.pdb ( medoid)	9.65623	6.52428	17.0359	63
cluster_8.pdb ( medoid)	7.62511	8.52447	15.002	65
cluster_9.pdb ( medoid)	5.38125	16.3531	38.57	88
cluster_10.pdb ( medoid)	1.28602	18.6623	41.3858	24