| Protein sequence(s) | AQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDV input pdb | |||||||||
| Peptide sequence | WDSRGKDSYETSQL | |||||||||
| Simulation mc cycles | 50 | |||||||||
| Peptide secondary structure psipred | CCCCCCCCCCCCCC | |||||||||
Unlikely to bind regions |
|
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| cluster name | cluster density | average rmsd | max rmsd | number of elements |
| cluster_1.pdb ( medoid) | 11.0269 | 7.70844 | 17.5997 | 85 |
| cluster_2.pdb ( medoid) | 8.8746 | 5.40869 | 13.0617 | 48 |
| cluster_3.pdb ( medoid) | 8.73764 | 4.12011 | 9.67697 | 36 |
| cluster_4.pdb ( medoid) | 7.318 | 7.92566 | 15.1193 | 58 |
| cluster_5.pdb ( medoid) | 6.38617 | 6.26354 | 12.8029 | 40 |
| cluster_6.pdb ( medoid) | 5.92738 | 8.60414 | 18.7211 | 51 |
| cluster_7.pdb ( medoid) | 4.86739 | 9.45065 | 17.1258 | 46 |
| cluster_8.pdb ( medoid) | 4.54928 | 8.13315 | 17.6945 | 37 |
| cluster_9.pdb ( medoid) | 3.78935 | 8.18082 | 20.1424 | 31 |
| cluster_10.pdb ( medoid) | 3.42024 | 9.64845 | 19.4067 | 33 |
