CABS-dock: fe80220a3d28fa5

Project name: fe80220a3d28fa5

Status: done

submitted: 2026-07-16 10:55:49, status changed: 2026-07-16 18:18:20

Project settings

Protein sequence(s)

CHQVRGSDLQVCLPKGPTCCSRKMEEKYQLTARLNMEQLLQSASMELKFLIIQNAAVFQEAFEIVVRHAKNYTNAMFKNNYPSLTPQAFEFVGEFFTDVSLYILGSDINVDDMVNELFDSLFPVIYTQLMNPGLDINECLRGARRDLKVFGNFPKLIMTQVSKSLQVTRIFLQALNLGIEVINTTDHLKFSKDCGRMLTRMWYCSYCQGLMMVKPCGGYCNVVMQGCMAGVVEIDKYWREYILSLEELVNGMDMENVLLGLFSTIHDSIQYVQKNAGKLTTTIGKLCTLSSRRRELIQKLKSFISFYSALPGYICSHSPVAENDTLCWNGQELVERYSQEPVVSQIIDKLKHINQLLRTMS input pdb

Peptide sequence

KIDQFTIYFGFM

Simulation mc cycles

Peptide secondary structure psipred

CCCEEEEEEECC

Flexible regions

119:A - 129:A

206:A - 219:A

321:A - 332:A

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	30.0804	5.68476	16.6624	171
cluster_2.pdb ( medoid)	18.9315	5.91608	42.6045	112
cluster_3.pdb ( medoid)	17.93	7.58506	39.4272	136
cluster_4.pdb ( medoid)	14.8824	5.91302	31.2902	88
cluster_5.pdb ( medoid)	9.59072	14.1804	37.797	136
cluster_6.pdb ( medoid)	9.17621	10.6798	31.4634	98
cluster_7.pdb ( medoid)	6.34929	17.1673	57.58	109
cluster_8.pdb ( medoid)	6.34194	11.6684	25.6052	74
cluster_9.pdb ( medoid)	4.21156	12.8219	40.3287	54
cluster_10.pdb ( medoid)	1.21591	18.0935	35.722	22