CABS-dock: fe8e8ff2031d658

Project name: fe8e8ff2031d658

Status: done

submitted: 2026-01-22 13:12:34, status changed: 2026-01-22 16:40:34

Project settings

Protein sequence(s)	GSLFQLKRETDDLEQWISSEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIIGQERVDNVNAFIERLLIDAGHSEAATTIAEWKDGLNEMWADLLLELIDDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTAFERELHLLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACA input pdb
Peptide sequence	EVNGDFIQKEEDTEQE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	21.4729	7.3581	27.7764	158
cluster_2.pdb ( medoid)	19.7308	6.38597	27.6518	126
cluster_3.pdb ( medoid)	17.9406	5.12803	25.1104	92
cluster_4.pdb ( medoid)	16.4854	6.97588	26.6177	115
cluster_5.pdb ( medoid)	15.3669	7.809	30.4319	120
cluster_6.pdb ( medoid)	14.6915	7.01084	23.716	103
cluster_7.pdb ( medoid)	14.6731	7.56489	25.3759	111
cluster_8.pdb ( medoid)	11.9184	6.7962	15.636	81
cluster_9.pdb ( medoid)	8.95067	6.47996	19.7764	58
cluster_10.pdb ( medoid)	2.28793	15.7348	32.9478	36