Protein sequence(s) | MAPGGYVAPKAVWLPAVKAKGLEISSGTFTHRQGHIYMEEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVVSQYIYQVYDSILKNGGYVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDDIPNENELQFQIKECHLNADTVSSSKLQNNNVYTIAKRNVEGQDMLLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILKN input pdb |
Peptide sequence | SFGDGFADF |
Simulation mc cycles | 50 |
Peptide secondary structure | CCCCHHHHC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 26.7684 | 3.47425 | 16.0515 | 93 |
cluster_2.pdb ( medoid) | 23.02 | 7.42834 | 42.7897 | 171 |
cluster_3.pdb ( medoid) | 22.5597 | 1.95038 | 11.4128 | 44 |
cluster_4.pdb ( medoid) | 18.437 | 4.39335 | 17.2221 | 81 |
cluster_5.pdb ( medoid) | 16.2732 | 7.49701 | 50.3099 | 122 |
cluster_6.pdb ( medoid) | 11.4004 | 12.8943 | 35.3187 | 147 |
cluster_7.pdb ( medoid) | 11.0117 | 6.08446 | 15.6041 | 67 |
cluster_8.pdb ( medoid) | 9.09372 | 13.3059 | 48.3254 | 121 |
cluster_9.pdb ( medoid) | 4.36806 | 19.9173 | 61.8706 | 87 |
cluster_10.pdb ( medoid) | 2.83228 | 16.9475 | 45.5415 | 48 |