Index

C

CABS (class in pycabs) Calculate (class in pycabs) contact_map() (in module pycabs)

convertPdbToDcd() (pycabs.CABS method) createLatticeReplicas() (pycabs.CABS method)

D

daemon (pycabs.Monitor attribute)

distance() (pycabs.Template method)

E

Errors

G

generateConstraints() (pycabs.CABS method) generateConstraintsOld() (pycabs.CABS method)

getEnergy() (pycabs.CABS method) getTraCoordinates() (pycabs.CABS method)

H

heat_map() (in module pycabs)

I

Info (class in pycabs)

L

loadSGCoordinates() (in module pycabs) (pycabs.CABS method)

loadTRAFCoordinates() (in module pycabs)

M

modeling() (pycabs.CABS method)

Monitor (class in pycabs)

P

parseDSSPOutput() (in module pycabs) parsePDBfile() (in module pycabs) parsePorterOutput() (in module pycabs)

parsePsipredOutput() (in module pycabs) processTrajectory() (pycabs.Calculate method) pycabs (module)

R

rmsd() (in module pycabs) rng_seed (pycabs.CABS attribute)

run() (pycabs.Monitor method)

S

saveMedoids() (in module pycabs) savePdbModel() (pycabs.CABS method)

sgToPdb() (pycabs.CABS method)

T

Template (class in pycabs) terminate() (pycabs.Monitor method)

trafToPdb() (pycabs.CABS method)