Project name: mDASPO [mutate: VA101T, LA161T, IA290L] [mutate: VA131E] [mutate: LA160E] [mutate: LA290Q]

Status: done

submitted: 2018-02-20 16:20:40, status changed: 2018-02-20 16:28:53
Settings
Chain sequence(s) A: MDTVCIAVVGAGVIGLSTAACISQLVPGCTVTVISDRFTPDTTSNVAAGMLIPHTYADTPVPTQKRWFRETFEHLSEIAKSAEAADAGVHLVSGWQIFHSTPAEEVPFWADVVLGFRKMTEAELKRFPQYEFGQAFTTLKCETSAYLPWLERRIKGSGGETLTWRIEDLWELQPSFDIVVNCSGLGSRRLVGDPMISPVRGQVLQARAPWVKHFIRDGGGLTYVYPGMSYVTLGGTRQKGDWNRSPDAELSREIFSRCCTLEPSLHRAYDIKEKVGLRPSRPGVRLQKELLVRGQQTLPVVHNYGHGSGGISVHWGSALEATRLVMECIHTLRTPASLSKL
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues LA290Q
Energy difference between WT (input) and mutated protein (by FoldX) 0.791234 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.597
Maximal score value
1.0486
Average score
-0.7009
Total score value
-238.9912

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1117
2 D A -1.3416
3 T A -0.7954
4 V A 0.0000
5 C A -0.4177
6 I A 0.0000
7 A A 0.0000
8 V A 0.0000
9 V A 0.0000
10 G A -0.8105
11 A A 0.0000
12 G A -0.3999
13 V A 0.0000
14 I A 0.1641
15 G A 0.0000
16 L A 0.0000
17 S A 0.0000
18 T A 0.0000
19 A A 0.0000
20 A A -0.7990
21 C A 0.0000
22 I A 0.0000
23 S A -0.7064
24 Q A -1.1995
25 L A 0.0000
26 V A 0.0000
27 P A -0.6877
28 G A -0.9125
29 C A -0.6877
30 T A -0.7487
31 V A 0.0000
32 T A 0.0000
33 V A 0.0000
34 I A 0.0000
35 S A 0.0000
36 D A -3.2119
37 R A -2.9367
38 F A -1.1814
39 T A 0.0000
40 P A -0.8099
41 D A -1.3973
42 T A -1.0122
43 T A -0.4509
44 S A 0.0000
45 N A 0.0000
46 V A -0.1545
47 A A -0.0508
48 A A -0.0283
49 G A 0.0000
50 M A 0.0000
51 L A 0.0000
52 I A 0.1113
53 P A -0.2023
54 H A -0.4880
55 T A -0.3172
56 Y A 0.0073
57 A A -0.4582
58 D A -0.7836
59 T A -0.3519
60 P A -0.3159
61 V A -0.3045
62 P A -0.7125
63 T A -0.6896
64 Q A -0.8354
65 K A -1.2093
66 R A -1.4788
67 W A 0.0000
68 F A 0.0000
69 R A -1.9578
70 E A -1.6628
71 T A 0.0000
72 F A 0.0000
73 E A -2.7914
74 H A -2.1278
75 L A 0.0000
76 S A -1.9946
77 E A -2.8349
78 I A -1.9991
79 A A -1.8455
80 K A -2.3877
81 S A -1.6994
82 A A -1.4436
83 E A -2.5288
84 A A -2.0018
85 A A -1.6735
86 D A -2.4047
87 A A 0.0000
88 G A 0.0000
89 V A 0.0000
90 H A -0.7523
91 L A 0.4680
92 V A -0.0624
93 S A -0.0899
94 G A 0.0000
95 W A -0.2640
96 Q A 0.0000
97 I A 0.0000
98 F A -0.7235
99 H A -1.6594
100 S A -0.9252
101 T A -0.8364
102 P A -0.6320
103 A A -0.7040
104 E A -1.5300
105 E A 0.0000
106 V A -0.3903
107 P A -0.4319
108 F A -0.2885
109 W A 0.0000
110 A A -0.0292
111 D A -1.1502
112 V A 0.0000
113 V A 0.0000
114 L A 1.0486
115 G A 0.3915
116 F A 0.8692
117 R A -0.9550
118 K A -1.9182
119 M A 0.0000
120 T A -1.6831
121 E A -2.9489
122 A A -2.0244
123 E A -2.1575
124 L A -2.7394
125 K A -3.5970
126 R A -3.1802
127 F A 0.0000
128 P A -2.1565
129 Q A -2.2027
130 Y A -2.0062
131 E A -2.6301
132 F A -1.2247
133 G A 0.0000
134 Q A 0.0000
135 A A 0.0000
136 F A 0.0000
137 T A 0.7585
138 T A 0.0000
139 L A 0.0000
140 K A 0.0000
141 C A 0.0000
142 E A -0.5269
143 T A 0.0000
144 S A -0.3578
145 A A -0.5037
146 Y A 0.0000
147 L A 0.0000
148 P A -1.0456
149 W A -1.7212
150 L A 0.0000
151 E A -2.2632
152 R A -3.3981
153 R A -3.4451
154 I A 0.0000
155 K A -3.5016
156 G A -2.7011
157 S A -2.2024
158 G A -1.7930
159 G A -2.2394
160 E A -2.1662
161 T A -0.7079
162 L A -0.0944
163 T A -0.7537
164 W A -1.3308
165 R A -2.9100
166 I A 0.0000
167 E A -2.1686
168 D A -1.8626
169 L A 0.0000
170 W A -0.2702
171 E A -1.6722
172 L A 0.0000
173 Q A -0.7662
174 P A -0.6343
175 S A -0.5848
176 F A -0.1417
177 D A -0.4516
178 I A 0.0000
179 V A 0.0000
180 V A 0.0000
181 N A 0.0000
182 C A 0.0000
183 S A -0.6790
184 G A -0.2932
185 L A -0.3990
186 G A -0.9717
187 S A 0.0000
188 R A -1.9237
189 R A -2.5307
190 L A 0.0000
191 V A -0.8957
192 G A -1.0922
193 D A 0.0000
194 P A -0.3154
195 M A 0.0244
196 I A 0.0000
197 S A -0.6264
198 P A 0.0000
199 V A -1.0216
200 R A 0.0000
201 G A 0.0000
202 Q A 0.0000
203 V A 0.0000
204 L A 0.0000
205 Q A -1.1084
206 A A 0.0000
207 R A -0.9182
208 A A 0.0000
209 P A -0.2791
210 W A -0.0179
211 V A -0.5977
212 K A -1.6845
213 H A -1.0498
214 F A 0.0000
215 I A 0.0000
216 R A 0.0000
217 D A 0.0000
218 G A -0.3658
219 G A -0.5650
220 G A -0.6083
221 L A -0.2072
222 T A 0.0000
223 Y A 0.0000
224 V A 0.0000
225 Y A 0.0000
226 P A 0.0000
227 G A -0.2568
228 M A 0.1398
229 S A 0.0531
230 Y A 0.0405
231 V A 0.0000
232 T A 0.0000
233 L A 0.0000
234 G A 0.0000
235 G A 0.0000
236 T A 0.0000
237 R A -1.3081
238 Q A -1.7191
239 K A -2.1769
240 G A -1.3990
241 D A -1.2201
242 W A -0.3255
243 N A -1.6397
244 R A -2.2470
245 S A -1.5088
246 P A -1.4396
247 D A -1.7606
248 A A -1.6692
249 E A -2.5691
250 L A -1.5109
251 S A -1.6918
252 R A -2.5825
253 E A -1.6471
254 I A 0.0000
255 F A -0.7274
256 S A -0.9390
257 R A -0.9301
258 C A 0.0000
259 C A 0.0000
260 T A -0.7088
261 L A 0.0000
262 E A -0.8677
263 P A -1.1134
264 S A -1.0778
265 L A 0.0000
266 H A -1.7556
267 R A -2.3694
268 A A -1.2357
269 Y A -0.5359
270 D A -1.8651
271 I A -1.2131
272 K A -2.3612
273 E A -1.9972
274 K A -1.3762
275 V A 0.0000
276 G A -0.5903
277 L A -0.6637
278 R A -0.6379
279 P A 0.0000
280 S A -0.5684
281 R A -0.3512
282 P A -0.3333
283 G A -0.1868
284 V A -0.0762
285 R A -0.3873
286 L A -0.4797
287 Q A -1.2624
288 K A -2.0730
289 E A -1.5881
290 Q A -1.2718 mutated: LA290Q
291 L A 0.0131
292 V A 0.6530
293 R A -0.6205
294 G A -1.1184
295 Q A -1.5933
296 Q A -1.2639
297 T A -0.5352
298 L A 0.0000
299 P A 0.0000
300 V A 0.0000
301 V A 0.0000
302 H A 0.0000
303 N A 0.0000
304 Y A 0.0000
305 G A 0.0000
306 H A 0.0000
307 G A -0.4185
308 S A -0.4578
309 G A -0.3015
310 G A -0.1388
311 I A 0.0000
312 S A 0.0000
313 V A 0.0000
314 H A 0.0000
315 W A -0.1980
316 G A 0.0000
317 S A 0.0000
318 A A 0.0000
319 L A -0.0495
320 E A 0.0000
321 A A 0.0000
322 T A 0.0000
323 R A -1.2125
324 L A 0.0000
325 V A 0.0000
326 M A -0.7372
327 E A -1.5690
328 C A 0.0000
329 I A 0.0000
330 H A -1.0467
331 T A -0.6676
332 L A -0.4611
333 R A -1.7528
334 T A -0.8796
335 P A -0.9331
336 A A -0.6310
337 S A -0.5685
338 L A -0.7129
339 S A -0.9065
340 K A -1.6251
341 L A -0.7318

 

Laboratory of Theory of Biopolymers 2015