Project name: wild [mutate: IA73D, VA208D, MA72R, VA316K, VA209D, LA312R, LA285D, IA141D, LA335N]

Status: done

submitted: 2018-11-09 12:35:10, status changed: 2018-11-09 12:51:24
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Chain sequence(s) A: MRSGSHHHHHHRSDITSLYKKAGSAAAPFTMENLYFQSYQGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGLGKHNYCRNPDGDAKPWCHVLKNRRLTWEYCDVPSCSTCGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMRP
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues IA73D, VA208D, MA72R, VA316K, VA209D, LA312R, LA285D, IA141D, LA335N
Energy difference between WT (input) and mutated protein (by FoldX) -1.61034 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.6711
Maximal score value
1.2297
Average score
-0.8208
Total score value
-320.9138

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.0832
2 R A -1.5366
3 S A -0.6503
4 G A -0.5207
5 S A -0.3372
6 H A 0.0000
7 H A -0.5494
8 H A -0.7122
9 H A -1.1304
10 H A -1.8419
11 H A -1.6278
12 R A -1.7657
13 S A 0.0000
14 D A 0.0000
15 I A 0.8741
16 T A 0.0586
17 S A 0.1158
18 L A 0.2267
19 Y A 0.0000
20 K A -1.5254
21 K A -2.2763
22 A A -1.2246
23 G A -1.3128
24 S A -0.8783
25 A A 0.0000
26 A A 0.0121
27 A A 0.4178
28 P A -0.0139
29 F A 0.0000
30 T A -0.6209
31 M A -0.5233
32 E A -1.9851
33 N A -1.3345
34 L A 0.1384
35 Y A 0.8278
36 F A 0.1356
37 Q A -0.9128
38 S A -1.0304
39 Y A 0.0000
40 Q A 0.0000
41 G A -0.6842
42 N A -0.9181
43 S A 0.0000
44 D A -0.3436
45 C A 0.3601
46 Y A 1.0782
47 F A 0.0000
48 G A 0.0000
49 N A 0.0000
50 G A 0.0000
51 S A 0.0000
52 A A -0.9921
53 Y A 0.0000
54 R A -0.8042
55 G A -0.6622
56 T A -0.3871
57 H A -0.2309
58 S A -0.1047
59 L A -0.2612
60 T A 0.0000
61 E A -2.2301
62 S A -1.3951
63 G A -1.1678
64 A A -0.8160
65 S A -0.2672
66 C A 0.0000
67 L A -0.0037
68 P A -0.8710
69 W A 0.0000
70 N A -2.4953
71 S A -2.2642
72 R A -3.2318 mutated: MA72R
73 D A -3.2477 mutated: IA73D
74 L A 0.0000
75 I A -1.6060
76 G A -1.4209
77 K A -2.1578
78 V A -0.4815
79 Y A 0.9142
80 T A 0.3826
81 A A -0.0276
82 Q A -0.3393
83 N A -0.4951
84 P A -0.5133
85 S A -0.9422
86 A A 0.0000
87 Q A 0.0000
88 A A 0.0000
89 L A 0.0000
90 G A 0.0000
91 L A 0.0000
92 G A -1.5609
93 K A -2.3807
94 H A -1.3857
95 N A 0.0000
96 Y A -0.2160
97 C A 0.0000
98 R A 0.0000
99 N A 0.0000
100 P A -1.1539
101 D A -2.0428
102 G A -1.6743
103 D A -1.3116
104 A A -0.8229
105 K A -1.0038
106 P A 0.0000
107 W A -0.2376
108 C A 0.0000
109 H A 0.0000
110 V A 0.0000
111 L A -1.2302
112 K A -2.7673
113 N A -3.1739
114 R A -3.5244
115 R A -3.0731
116 L A -1.1998
117 T A -0.7271
118 W A 0.0224
119 E A -0.8701
120 Y A -0.4205
121 C A 0.0000
122 D A -1.4907
123 V A 0.0000
124 P A -0.2602
125 S A -0.1200
126 C A 0.0643
127 S A 0.0000
128 T A 0.0000
129 C A 0.0000
130 G A -0.1018
131 L A 0.2585
132 R A 0.0000
133 Q A -0.5890
134 Y A 0.4596
135 S A -0.1336
136 Q A -0.8851
137 P A -1.4787
138 Q A -2.0049
139 F A -1.7938
140 R A -3.0698
141 D A -2.8582 mutated: IA141D
142 K A -1.3846
143 G A -0.9533
144 G A -0.1869
145 L A 1.2297
146 F A 0.9104
147 A A -0.2347
148 D A -1.2849
149 I A 0.0000
150 A A -0.3996
151 S A 0.0000
152 H A 0.0000
153 P A 0.0000
154 W A 0.0000
155 Q A 0.0000
156 A A 0.0000
157 A A 0.0000
158 I A 0.0000
159 F A 0.0000
160 A A 0.0000
161 K A -2.5135
162 H A -2.7816
163 R A -3.4166
164 R A -3.6711
165 S A -2.0673
166 P A -1.6141
167 G A -2.2036
168 E A -2.7336
169 R A -2.3462
170 F A -0.8391
171 L A -0.1076
172 C A 0.0000
173 G A 0.0000
174 G A 0.0000
175 I A 0.0000
176 L A 0.0000
177 I A 0.0000
178 S A -0.7499
179 S A -1.2423
180 C A 0.0000
181 W A 0.0000
182 I A 0.0000
183 L A 0.0000
184 S A 0.0000
185 A A 0.0000
186 A A 0.0000
187 H A -1.4035
188 C A -0.5005
189 F A 0.0000
190 Q A 0.0000
191 E A -2.6268
192 R A -2.6073
193 F A -1.6836
194 P A -1.4490
195 P A -1.7867
196 H A -1.8984
197 H A -2.0270
198 L A 0.0000
199 T A 0.0000
200 V A 0.0000
201 I A 0.0000
202 L A -0.3378
203 G A 0.0000
204 R A 0.0000
205 T A -0.4841
206 Y A -0.3029
207 R A -1.5986
208 D A -2.6026 mutated: VA208D
209 D A -2.3485 mutated: VA209D
210 P A -2.0501
211 G A -2.3645
212 E A -3.1829
213 E A -2.2428
214 E A -2.7366
215 Q A -2.5040
216 K A -2.3911
217 F A 0.0000
218 E A -3.2475
219 V A 0.0000
220 E A -2.4686
221 K A -1.8845
222 Y A -0.5029
223 I A -0.4045
224 V A -0.6665
225 H A -1.4534
226 K A -2.6193
227 E A -2.7387
228 F A -2.1420
229 D A -2.5407
230 D A -3.1152
231 D A -2.9960
232 T A -2.2692
233 Y A 0.0000
234 D A -2.3397
235 N A -1.7809
236 D A 0.0000
237 I A 0.0000
238 A A 0.0000
239 L A 0.0000
240 L A 0.0000
241 Q A 0.0000
242 L A 0.0000
243 K A -2.8414
244 S A -2.4027
245 D A -3.3894
246 S A 0.0000
247 S A 0.0000
248 R A -2.3838
249 C A -1.7224
250 A A -1.3103
251 Q A -2.2580
252 E A -2.0897
253 S A -1.5341
254 S A 0.0000
255 V A 0.4871
256 V A 0.0000
257 R A -0.8625
258 T A 0.0000
259 V A 0.0000
260 C A 0.3626
261 L A 0.1985
262 P A 0.0000
263 P A -0.6558
264 A A -1.1904
265 D A -2.1339
266 L A -1.0342
267 Q A -1.4732
268 L A 0.0000
269 P A -1.6980
270 D A -2.2185
271 W A -1.0210
272 T A -0.8372
273 E A -1.7523
274 C A 0.0000
275 E A 0.0000
276 L A 0.0000
277 S A 0.0000
278 G A 0.0000
279 Y A 0.0000
280 G A 0.0000
281 K A -1.2969
282 H A -1.3868
283 E A -2.3782
284 A A -1.5532
285 D A -1.8872 mutated: LA285D
286 S A -0.9101
287 P A 0.0922
288 F A 1.1904
289 Y A -0.1414
290 S A -0.3680
291 E A 0.0000
292 R A -0.6489
293 L A 0.0000
294 K A 0.0532
295 E A 0.0000
296 A A 0.0000
297 H A -1.3876
298 V A 0.0000
299 R A -1.2353
300 L A 0.0000
301 Y A 0.0000
302 P A -1.0302
303 S A -1.2335
304 S A -1.2966
305 R A -2.4368
306 C A 0.0000
307 T A -2.0771
308 S A -1.7904
309 Q A 0.0000
310 H A 0.0000
311 L A 0.0000
312 R A -2.9195 mutated: LA312R
313 N A -2.3065
314 R A -2.3754
315 T A -2.2624
316 K A -2.8983 mutated: VA316K
317 T A -2.0919
318 D A -2.2357
319 N A 0.0000
320 M A 0.0000
321 L A -0.1544
322 C A 0.0000
323 A A 0.0000
324 G A 0.0000
325 D A -2.5063
326 T A -1.5819
327 R A 0.0000
328 S A -1.6414
329 G A -1.9080
330 G A -1.7893
331 P A -1.4916
332 Q A -2.2542
333 A A -1.6163
334 N A -1.9384
335 N A -2.1251 mutated: LA335N
336 H A -1.3688
337 D A -0.8965
338 A A -0.9915
339 C A -0.5968
340 Q A 0.0000
341 G A 0.0000
342 D A 0.0000
343 S A -0.0904
344 G A 0.0000
345 G A 0.0000
346 P A 0.0000
347 L A 0.0000
348 V A 0.0000
349 C A 0.0000
350 L A -1.2899
351 N A 0.0000
352 D A -2.5432
353 G A -1.7966
354 R A -1.4501
355 M A 0.0000
356 T A 0.0000
357 L A 0.0000
358 V A -0.0106
359 G A 0.0000
360 I A 0.0000
361 I A 0.0000
362 S A -0.3167
363 W A -0.1775
364 G A -0.3218
365 L A 0.3629
366 G A -0.7126
367 C A 0.0000
368 G A -1.5503
369 Q A -1.7707
370 K A -1.2505
371 D A -1.7911
372 V A 0.0000
373 P A 0.0000
374 G A 0.0000
375 V A 0.0000
376 Y A 0.0000
377 T A 0.0000
378 K A -0.4019
379 V A 0.0000
380 T A 0.0000
381 N A 0.0000
382 Y A 0.0000
383 L A 0.0000
384 D A -1.5127
385 W A 0.0000
386 I A 0.0000
387 R A -2.9048
388 D A -3.1396
389 N A -2.1021
390 M A 0.0000
391 R A -2.8499

 

Laboratory of Theory of Biopolymers 2015