Project name: 1408d88f3af2cef [mutate: TA38V]

Status: done

submitted: 2019-01-11 12:59:44, status changed: 2019-01-11 13:17:59
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Chain sequence(s) A: SKGEELFTGKVPILVELDGDVNGHKFSVSGEGEGDATKGKLTLKFICTTGKLPVPWPTLVTTLVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLKEFVTAAGIT
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues TA38V
Energy difference between WT (input) and mutated protein (by FoldX) 0.980617 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-4.1986
Maximal score value
0.3551
Average score
-1.0473
Total score value
-236.6866

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S A -1.9828
3 K A -2.4405
4 G A 0.0000
5 E A -2.0016
6 E A -2.4017
7 L A -1.1961
8 F A 0.0000
9 T A -0.8336
10 G A -1.1896
11 K A -2.0748
12 V A 0.0000
13 P A -1.4475
14 I A 0.0000
15 L A -1.0191
16 V A 0.0000
17 E A -2.0040
18 L A 0.0000
19 D A -3.4657
20 G A 0.0000
21 D A -3.0120
22 V A 0.0000
23 N A -2.1085
24 G A -1.7499
25 H A -2.2524
26 K A -3.0478
27 F A 0.0000
28 S A -1.7885
29 V A 0.0000
30 S A -1.0504
31 G A 0.0000
32 E A -2.1661
33 G A -1.7787
34 E A -1.8446
35 G A 0.0000
36 D A 0.0000
37 A A 0.0000
38 V A -0.2967 mutated: TA38V
39 K A -1.5403
40 G A 0.0000
41 K A -1.4006
42 L A 0.0000
43 T A -1.1473
44 L A 0.0000
45 K A -1.3845
46 F A 0.0000
47 I A -1.1029
48 C A 0.0000
49 T A -0.7688
50 T A -1.1754
51 G A -1.6879
52 K A -2.2877
53 L A 0.0000
54 P A -1.2003
55 V A 0.0000
56 P A 0.0000
57 W A 0.0000
58 P A 0.0000
59 T A 0.0000
60 L A 0.0000
61 V A 0.0000
62 T A -0.0039
63 T A 0.0000
64 L A 0.0000
68 V A -0.0846
69 Q A -0.1748
70 C A 0.0000
71 F A 0.0000
72 S A 0.0000
73 R A -1.2702
74 Y A 0.0000
75 P A -1.6508
76 D A -2.8898
77 H A -2.3773
78 M A 0.0000
79 K A -2.7804
80 R A -2.7772
81 H A -1.7416
82 D A 0.0000
83 F A 0.0000
84 F A 0.0000
85 K A 0.0000
86 S A -1.1653
87 A A 0.0000
88 M A 0.0000
89 P A -1.5079
90 E A -1.9477
91 G A 0.0000
92 Y A 0.0000
93 V A -0.8641
94 Q A 0.0000
95 E A -1.8936
96 R A 0.0000
97 T A -0.9553
98 I A 0.0000
99 S A -1.0371
100 F A 0.0000
101 K A -2.1467
102 D A -2.8036
103 D A -2.6134
104 G A 0.0000
105 N A -1.4773
106 Y A 0.0000
107 K A -2.3927
108 T A 0.0000
109 R A -3.4957
110 A A 0.0000
111 E A -2.1818
112 V A 0.0000
113 K A -1.3519
114 F A -1.4102
115 E A -1.6365
116 G A -1.7093
117 D A -2.1180
118 T A -1.5221
119 L A 0.0000
120 V A 0.0000
121 N A 0.0000
122 R A -2.4240
123 I A 0.0000
124 E A -4.1986
125 L A 0.0000
126 K A -3.3099
127 G A 0.0000
128 I A -1.2158
129 D A -2.2334
130 F A 0.0000
131 K A -3.7754
132 E A -3.8000
133 D A -3.3488
134 G A -2.6361
135 N A -2.0776
136 I A 0.0000
137 L A -1.6724
138 G A -1.8548
139 H A -1.4117
140 K A -2.0002
141 L A -1.5277
142 E A -1.8391
143 Y A -0.5045
144 N A -0.5561
145 Y A -0.8086
146 N A -1.2050
147 S A -1.2379
148 H A -1.4104
149 N A -1.2063
150 V A 0.0000
151 Y A 0.3551
152 I A 0.0000
153 T A -1.2553
154 A A -1.8802
155 D A -2.4871
156 K A -3.1376
157 Q A -3.1940
158 K A -3.4019
159 N A -2.4934
160 G A 0.0000
161 I A 0.0000
162 K A -1.2428
163 A A 0.0000
164 N A -1.0793
165 F A 0.0000
166 K A -1.9476
167 I A 0.0000
168 R A -1.7043
169 H A 0.0000
170 N A -1.4932
171 I A 0.0000
172 E A -3.2372
173 D A -3.0278
174 G A -1.9489
175 S A -1.0825
176 V A -0.5203
177 Q A 0.0000
178 L A -1.1591
179 A A 0.0000
180 D A -1.1498
181 H A 0.0000
182 Y A 0.0348
183 Q A 0.0000
184 Q A -1.4324
185 N A 0.0000
186 T A -0.8735
187 P A -0.8574
188 I A -0.2440
189 G A -1.2023
190 D A -2.0684
191 G A -1.4547
192 P A -0.9751
193 V A -0.5826
194 L A -0.3007
195 L A -0.1817
196 P A 0.0000
197 D A -2.4523
198 N A -1.7878
199 H A 0.0000
200 Y A -0.0556
201 L A 0.0000
202 S A -0.5673
203 T A -0.7521
204 Q A -1.4139
205 S A -0.9339
206 A A -0.5338
207 L A -0.4490
208 S A -0.9675
209 K A -1.8786
210 D A -2.1504
211 P A -1.8083
212 N A -2.4529
213 E A -2.6085
214 K A -3.0467
215 R A -3.1659
216 D A -2.1848
217 H A 0.0000
218 M A 0.0000
219 V A -0.9343
220 L A 0.0000
221 K A -1.3495
222 E A -0.7127
223 F A -0.1188
224 V A 0.0000
225 T A -0.5719
226 A A 0.0000
227 A A -0.3090
228 G A -0.4935
229 I A -0.4947
230 T A -0.1843

 

Laboratory of Theory of Biopolymers 2015