| Chain sequence(s) |
A: GHKGHKS
C: GHKGHKS B: GHKGHKS E: GHKGHKS D: GHKGHKS G: GHKGHKS F: GHKGHKS I: GHKGHKS H: GHKGHKS K: GHKGHKS J: GHKGHKS L: GHKGHKS input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23)
[INFO] Main: Simulation completed successfully. (00:03:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.1810 | |
| 2 | H | A | -3.3530 | |
| 3 | K | A | -3.7815 | |
| 4 | G | A | -3.0956 | |
| 5 | H | A | -3.8154 | |
| 6 | K | A | -3.0759 | |
| 7 | S | A | -1.5986 | |
| 1 | G | B | -2.5913 | |
| 2 | H | B | -3.3751 | |
| 3 | K | B | -4.4665 | |
| 4 | G | B | -4.6118 | |
| 5 | H | B | -3.9531 | |
| 6 | K | B | -3.8403 | |
| 7 | S | B | -2.2199 | |
| 1 | G | C | -3.6331 | |
| 2 | H | C | -3.4797 | |
| 3 | K | C | -4.6256 | |
| 4 | G | C | -3.4920 | |
| 5 | H | C | -3.4541 | |
| 6 | K | C | -3.0147 | |
| 7 | S | C | -1.6115 | |
| 1 | G | D | -2.8195 | |
| 2 | H | D | -3.1797 | |
| 3 | K | D | -3.5677 | |
| 4 | G | D | -3.5042 | |
| 5 | H | D | -3.6130 | |
| 6 | K | D | -3.0661 | |
| 7 | S | D | -2.0460 | |
| 1 | G | E | -3.0677 | |
| 2 | H | E | -3.5557 | |
| 3 | K | E | -3.9550 | |
| 4 | G | E | -2.9744 | |
| 5 | H | E | -3.0874 | |
| 6 | K | E | -2.7396 | |
| 7 | S | E | -1.3957 | |
| 1 | G | F | -2.3218 | |
| 2 | H | F | -2.3921 | |
| 3 | K | F | -3.0917 | |
| 4 | G | F | -2.5287 | |
| 5 | H | F | -2.5902 | |
| 6 | K | F | -2.6380 | |
| 7 | S | F | -1.3575 | |
| 1 | G | G | -1.8804 | |
| 2 | H | G | -2.9909 | |
| 3 | K | G | -3.5669 | |
| 4 | G | G | -3.5281 | |
| 5 | H | G | -2.8651 | |
| 6 | K | G | -2.8574 | |
| 7 | S | G | -1.6142 | |
| 1 | G | H | -2.9372 | |
| 2 | H | H | -2.9278 | |
| 3 | K | H | -4.0336 | |
| 4 | G | H | -2.5853 | |
| 5 | H | H | -3.4376 | |
| 6 | K | H | -2.8207 | |
| 7 | S | H | -1.6421 | |
| 1 | G | I | -2.9080 | |
| 2 | H | I | -3.0015 | |
| 3 | K | I | -3.3472 | |
| 4 | G | I | -3.6470 | |
| 5 | H | I | -3.1286 | |
| 6 | K | I | -2.7787 | |
| 7 | S | I | -1.5334 | |
| 1 | G | J | -2.5657 | |
| 2 | H | J | -3.1666 | |
| 3 | K | J | -4.1598 | |
| 4 | G | J | -3.0548 | |
| 5 | H | J | -3.0965 | |
| 6 | K | J | -2.6779 | |
| 7 | S | J | -1.3280 | |
| 1 | G | K | -2.4299 | |
| 2 | H | K | -2.9920 | |
| 3 | K | K | -4.2368 | |
| 4 | G | K | -3.7716 | |
| 5 | H | K | -3.4289 | |
| 6 | K | K | -3.1225 | |
| 7 | S | K | -1.6223 | |
| 1 | G | L | -2.3719 | |
| 2 | H | L | -2.8706 | |
| 3 | K | L | -3.3610 | |
| 4 | G | L | -3.1628 | |
| 5 | H | L | -3.4232 | |
| 6 | K | L | -2.6825 | |
| 7 | S | L | -1.6798 |