| Chain sequence(s) |
A: FEFEFEGSKGH
B: FEFEFEGSKGH input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.7466 | |
| 2 | E | A | -0.0625 | |
| 3 | F | A | 1.3183 | |
| 4 | E | A | -0.9273 | |
| 5 | F | A | 0.3751 | |
| 6 | E | A | -2.0235 | |
| 7 | G | A | -2.6816 | |
| 8 | S | A | -2.9951 | |
| 9 | K | A | -3.4938 | |
| 10 | G | A | -2.5064 | |
| 11 | H | A | -2.1925 | |
| 1 | F | B | 1.1515 | |
| 2 | E | B | -1.2309 | |
| 3 | F | B | -0.5431 | |
| 4 | E | B | -2.3406 | |
| 5 | F | B | -1.1892 | |
| 6 | E | B | -3.2502 | |
| 7 | G | B | -2.3921 | |
| 8 | S | B | -3.0036 | |
| 9 | K | B | -3.4707 | |
| 10 | G | B | -2.3780 | |
| 11 | H | B | -1.8735 |