| Chain sequence(s) |
A: SDSDLPPVAIIGVGKCNLSLEELLENEKRNDKLYELREKLRREEIEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.2579 | |
| 2 | D | A | -2.1380 | |
| 3 | S | A | -1.5729 | |
| 4 | D | A | -1.8093 | |
| 5 | L | A | 0.4149 | |
| 6 | P | A | 0.7639 | |
| 7 | P | A | 0.7554 | |
| 8 | V | A | 2.6863 | |
| 9 | A | A | 2.5747 | |
| 10 | I | A | 3.6392 | |
| 11 | I | A | 3.4876 | |
| 12 | G | A | 1.5714 | |
| 13 | V | A | 1.7381 | |
| 14 | G | A | -0.5039 | |
| 15 | K | A | -1.4656 | |
| 16 | C | A | -0.3833 | |
| 17 | N | A | -0.9365 | |
| 18 | L | A | 0.1141 | |
| 19 | S | A | -0.0578 | |
| 20 | L | A | 0.4509 | |
| 21 | E | A | -1.7937 | |
| 22 | E | A | -2.1791 | |
| 23 | L | A | -1.1646 | |
| 24 | L | A | -1.9380 | |
| 25 | E | A | -4.1348 | |
| 26 | N | A | -3.9331 | |
| 27 | E | A | -4.9874 | |
| 28 | K | A | -5.2808 | |
| 29 | R | A | -5.1096 | |
| 30 | N | A | -4.6243 | |
| 31 | D | A | -4.9817 | |
| 32 | K | A | -4.2638 | |
| 33 | L | A | -2.5352 | |
| 34 | Y | A | -1.8488 | |
| 35 | E | A | -2.7964 | |
| 36 | L | A | -1.9728 | |
| 37 | R | A | -2.9325 | |
| 38 | E | A | -3.1387 | |
| 39 | K | A | -3.4949 | |
| 40 | L | A | -2.3738 | |
| 41 | R | A | -3.8725 | |
| 42 | R | A | -4.2588 | |
| 43 | E | A | -4.2570 | |
| 44 | E | A | -3.5105 | |
| 45 | I | A | -1.3935 | |
| 46 | E | A | -3.3002 | |
| 47 | K | A | -3.1805 |