| Chain sequence(s) |
A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.9145 | |
| 2 | C | A | -1.3517 | |
| 3 | N | A | -1.5272 | |
| 4 | T | A | -1.0821 | |
| 5 | A | A | -0.9581 | |
| 6 | T | A | -0.9405 | |
| 7 | C | A | -0.5310 | |
| 8 | A | A | -0.5992 | |
| 9 | T | A | -0.6228 | |
| 10 | Q | A | -1.0570 | |
| 11 | R | A | -1.1744 | |
| 12 | L | A | 0.6194 | |
| 13 | A | A | 0.0000 | |
| 14 | N | A | -0.5891 | |
| 15 | F | A | 0.9947 | |
| 16 | L | A | 0.7822 | |
| 17 | V | A | -0.7323 | |
| 18 | R | A | -1.4530 | |
| 19 | S | A | -0.9462 | |
| 20 | S | A | -1.2586 | |
| 21 | N | A | -1.8041 | |
| 22 | N | A | -1.7204 | |
| 23 | L | A | 0.3967 | |
| 24 | G | A | 0.3467 | |
| 25 | P | A | 0.9724 | |
| 26 | V | A | 2.3961 | |
| 27 | L | A | 2.0734 | |
| 28 | P | A | 0.5936 | |
| 29 | P | A | 0.0344 | |
| 30 | T | A | -0.3001 | |
| 31 | N | A | -0.6456 | |
| 32 | V | A | 0.8329 | |
| 33 | G | A | -0.4838 | |
| 34 | S | A | -0.7486 | |
| 35 | N | A | -1.5117 | |
| 36 | T | A | -0.1509 | |
| 37 | Y | A | 0.9654 | |
| 1 | K | B | -1.9140 | |
| 2 | C | B | -1.3555 | |
| 3 | N | B | -1.5289 | |
| 4 | T | B | -1.0784 | |
| 5 | A | B | -0.9559 | |
| 6 | T | B | -0.9490 | |
| 7 | C | B | -0.5690 | |
| 8 | A | B | -0.6062 | |
| 9 | T | B | -0.6171 | |
| 10 | Q | B | -1.1161 | |
| 11 | R | B | -1.1725 | |
| 12 | L | B | 0.6935 | |
| 13 | A | B | 0.0000 | |
| 14 | N | B | -0.5228 | |
| 15 | F | B | 1.0285 | |
| 16 | L | B | 0.7880 | |
| 17 | V | B | -0.7323 | |
| 18 | R | B | -1.4800 | |
| 19 | S | B | -0.9738 | |
| 20 | S | B | -1.2796 | |
| 21 | N | B | -1.9222 | |
| 22 | N | B | -1.8018 | |
| 23 | L | B | 0.2937 | |
| 24 | G | B | 0.2906 | |
| 25 | P | B | 0.9520 | |
| 26 | V | B | 2.3862 | |
| 27 | L | B | 2.0728 | |
| 28 | P | B | 0.5936 | |
| 29 | P | B | 0.0348 | |
| 30 | T | B | -0.2552 | |
| 31 | N | B | -0.6453 | |
| 32 | V | B | 0.8335 | |
| 33 | G | B | -0.3434 | |
| 34 | S | B | -0.7270 | |
| 35 | N | B | -1.5556 | |
| 36 | T | B | -0.2895 | |
| 37 | Y | B | 0.9666 |