Project name: query_structure

Status: done

Started: 2026-03-16 23:47:00
Settings
Chain sequence(s) A: GVIPCGESCVFIPCISSVIGCSCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:20)
Show buried residues

Minimal score value
-2.2801
Maximal score value
2.9878
Average score
0.5452
Total score value
16.9004

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.0222
2 V A 1.8820
3 I A 1.9887
4 P A 0.5905
5 C A 0.5670
6 G A -0.3077
7 E A 0.1295
8 S A 0.2773
9 C A 0.8709
10 V A 1.4892
11 F A 2.7356
12 I A 2.7073
13 P A 1.5325
14 C A 0.0000
15 I A 2.7674
16 S A 1.9043
17 S A 1.7594
18 V A 2.9878
19 I A 2.7054
20 G A 0.8037
21 C A 0.0000
22 S A -0.5072
23 C A -0.6648
24 K A -2.1870
25 N A -2.2801
26 K A -1.6526
27 V A -1.1294
28 C A 0.0000
29 Y A -0.4156
30 R A -0.5452
31 N A -1.0863
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Laboratory of Theory of Biopolymers 2018