Chain sequence(s) |
A: MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRWGRGFGLVEHVLGQDSILNQSNSIFGCIFYTLQLLLGCLRTRWASVLMLLSSLVSLAGSVYLAWILFFVLYDFCIVCITTYAINVSLMWLSFRKVQEPQGKAKRH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LC65A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.5575 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:58) [INFO] FoldX: Starting FoldX energy minimalization (00:02:04) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:58) [INFO] Main: Simulation completed successfully. (00:03:00) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.9691 | |
2 | G | A | -0.3146 | |
3 | S | A | -0.3099 | |
4 | T | A | 0.1068 | |
5 | W | A | 1.1367 | |
6 | G | A | -0.1587 | |
7 | S | A | -0.2832 | |
8 | P | A | -0.1020 | |
9 | G | A | 0.0378 | |
10 | W | A | 1.4390 | |
11 | V | A | 1.7856 | |
12 | R | A | 0.0000 | |
13 | L | A | 0.4950 | |
14 | A | A | 0.1453 | |
15 | L | A | 0.2259 | |
16 | C | A | 0.0000 | |
17 | L | A | 0.7711 | |
18 | T | A | 0.0938 | |
19 | G | A | 0.0000 | |
20 | L | A | 0.7124 | |
21 | V | A | 1.8716 | |
22 | L | A | 0.5739 | |
23 | S | A | 0.0000 | |
24 | L | A | 0.7902 | |
25 | Y | A | 0.2990 | |
26 | A | A | 0.0000 | |
27 | L | A | 0.3008 | |
28 | H | A | -0.8791 | |
29 | V | A | 0.0000 | |
30 | K | A | -0.2614 | |
31 | A | A | -0.0271 | |
32 | A | A | -0.0740 | |
33 | R | A | -0.6828 | |
34 | A | A | -0.3642 | |
35 | R | A | -2.1597 | |
36 | D | A | -2.5111 | |
37 | R | A | -2.4896 | |
38 | D | A | -2.0695 | |
39 | Y | A | -0.3710 | |
40 | R | A | -1.7926 | |
41 | A | A | 0.0000 | |
42 | L | A | 1.5477 | |
43 | C | A | 0.0000 | |
44 | D | A | 0.0000 | |
45 | V | A | 1.7299 | |
46 | G | A | 0.1091 | |
47 | T | A | -0.1036 | |
48 | A | A | 0.1141 | |
49 | I | A | 0.5533 | |
50 | S | A | 0.0433 | |
51 | C | A | 0.0000 | |
52 | S | A | 0.0000 | |
53 | R | A | -1.0297 | |
54 | V | A | 0.0211 | |
55 | F | A | 0.1910 | |
56 | S | A | -0.1814 | |
57 | S | A | -0.3970 | |
58 | R | A | -1.7962 | |
59 | W | A | 0.0037 | |
60 | G | A | -0.2949 | |
61 | R | A | -1.8558 | |
62 | G | A | 0.0000 | |
63 | F | A | 0.5349 | |
64 | G | A | 0.1655 | |
65 | C | A | 0.4278 | mutated: LC65A |
66 | V | A | 0.0000 | |
67 | E | A | -0.5601 | |
68 | H | A | -0.7124 | |
69 | V | A | 1.8413 | |
70 | L | A | 1.6554 | |
71 | G | A | -0.1689 | |
72 | Q | A | -1.5754 | |
73 | D | A | -2.0117 | |
74 | S | A | 0.0041 | |
75 | I | A | 2.1586 | |
76 | L | A | 1.2147 | |
77 | N | A | 0.0000 | |
78 | Q | A | -0.6130 | |
79 | S | A | -0.4451 | |
80 | N | A | -0.1902 | |
81 | S | A | 0.0222 | |
82 | I | A | 0.5372 | |
83 | F | A | 0.4612 | |
84 | G | A | 0.0153 | |
85 | C | A | 0.4387 | |
86 | I | A | 2.0692 | |
87 | F | A | 0.5882 | |
88 | Y | A | 0.0000 | |
89 | T | A | 0.0375 | |
90 | L | A | 0.5322 | |
91 | Q | A | 0.0000 | |
92 | L | A | 0.5278 | |
93 | L | A | 1.5936 | |
94 | L | A | 0.0000 | |
95 | G | A | 0.0053 | |
96 | C | A | 0.2181 | |
97 | L | A | 0.0367 | |
98 | R | A | -1.8125 | |
99 | T | A | -0.6768 | |
100 | R | A | -1.6299 | |
101 | W | A | 0.8494 | |
102 | A | A | 0.0000 | |
103 | S | A | 0.0000 | |
104 | V | A | 0.4585 | |
105 | L | A | 0.6718 | |
106 | M | A | 0.0000 | |
107 | L | A | 0.4082 | |
108 | L | A | 1.3217 | |
109 | S | A | 0.1995 | |
110 | S | A | 0.0000 | |
111 | L | A | 1.1804 | |
112 | V | A | 1.9233 | |
113 | S | A | 0.3366 | |
114 | L | A | 0.2631 | |
115 | A | A | 0.0900 | |
116 | G | A | -0.0722 | |
117 | S | A | 0.0000 | |
118 | V | A | 1.8513 | |
119 | Y | A | 0.7952 | |
120 | L | A | 0.3039 | |
121 | A | A | 0.2629 | |
122 | W | A | 1.1885 | |
123 | I | A | 0.0000 | |
124 | L | A | 0.0000 | |
125 | F | A | 1.7842 | |
126 | F | A | 2.2913 | |
127 | V | A | 1.0281 | |
128 | L | A | 0.5416 | |
129 | Y | A | 1.4822 | |
130 | D | A | 0.0000 | |
131 | F | A | 1.8630 | |
132 | C | A | 0.0000 | |
133 | I | A | 0.7716 | |
134 | V | A | 0.0000 | |
135 | C | A | 0.0000 | |
136 | I | A | 0.5731 | |
137 | T | A | 0.0667 | |
138 | T | A | 0.0104 | |
139 | Y | A | 0.1600 | |
140 | A | A | 0.0857 | |
141 | I | A | 0.0000 | |
142 | N | A | 0.0000 | |
143 | V | A | 0.9734 | |
144 | S | A | 0.0915 | |
145 | L | A | 0.0000 | |
146 | M | A | 0.0000 | |
147 | W | A | 1.2289 | |
148 | L | A | 0.4465 | |
149 | S | A | 0.0000 | |
150 | F | A | 1.2454 | |
151 | R | A | -1.6324 | |
152 | K | A | -0.5849 | |
153 | V | A | 0.5058 | |
154 | Q | A | -1.3828 | |
155 | E | A | -2.0797 | |
156 | P | A | -0.7915 | |
157 | Q | A | -1.3259 | |
158 | G | A | -0.9755 | |
159 | K | A | -1.7710 | |
160 | A | A | -0.5507 | |
161 | K | A | -2.0299 | |
162 | R | A | -2.3465 | |
163 | H | A | -1.3418 |