| Chain sequence(s) |
A: TFFLIACMLRSPFCPWITTTTASTASNND
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 27 | T | A | 2.2190 | |
| 28 | F | A | 3.7376 | |
| 29 | F | A | 4.3941 | |
| 30 | L | A | 3.8744 | |
| 31 | I | A | 3.4985 | |
| 32 | A | A | 2.9671 | |
| 33 | C | A | 2.7509 | |
| 34 | M | A | 2.4607 | |
| 35 | L | A | 1.8158 | |
| 36 | R | A | -0.3810 | |
| 37 | S | A | 0.0065 | |
| 38 | P | A | 1.7762 | |
| 39 | F | A | 2.4003 | |
| 40 | C | A | 2.3781 | |
| 41 | P | A | 1.8250 | |
| 42 | W | A | 2.3680 | |
| 43 | I | A | 2.8429 | |
| 44 | T | A | 1.4768 | |
| 45 | T | A | 0.5614 | |
| 46 | T | A | 0.0652 | |
| 47 | T | A | -0.1624 | |
| 48 | A | A | -0.1120 | |
| 49 | S | A | -0.4113 | |
| 50 | T | A | -0.5368 | |
| 51 | A | A | -1.0263 | |
| 52 | S | A | -1.0360 | |
| 53 | N | A | -2.3778 | |
| 54 | N | A | -2.5118 | |
| 55 | D | A | -2.7170 |