| Chain sequence(s) |
A: DEEELKKQIEEYKKKLNELAKEIFRAESLEAELKEKDPEKAKEAAAKLEELLAEFRKLAKELAKLAKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -4.2162 | |
| 2 | E | A | -4.7959 | |
| 3 | E | A | -5.1614 | |
| 4 | E | A | -5.1490 | |
| 5 | L | A | -4.1300 | |
| 6 | K | A | -5.0259 | |
| 7 | K | A | -5.2159 | |
| 8 | Q | A | -3.9712 | |
| 9 | I | A | -3.3854 | |
| 10 | E | A | -4.4563 | |
| 11 | E | A | -4.5518 | |
| 12 | Y | A | -3.5367 | |
| 13 | K | A | -4.1167 | |
| 14 | K | A | -4.7462 | |
| 15 | K | A | -3.9222 | |
| 16 | L | A | 0.0000 | |
| 17 | N | A | -4.0080 | |
| 18 | E | A | -4.0588 | |
| 19 | L | A | 0.0000 | |
| 20 | A | A | -1.8728 | |
| 21 | K | A | -2.5359 | |
| 22 | E | A | -2.3947 | |
| 23 | I | A | 0.0000 | |
| 24 | F | A | -0.1333 | |
| 25 | R | A | -1.9093 | |
| 26 | A | A | 0.0000 | |
| 27 | E | A | -2.0350 | |
| 28 | S | A | -1.3032 | |
| 29 | L | A | -1.1744 | |
| 30 | E | A | -3.1522 | |
| 31 | A | A | -2.5054 | |
| 32 | E | A | -3.5702 | |
| 33 | L | A | -4.3981 | |
| 34 | K | A | -4.7054 | |
| 35 | E | A | -4.2643 | |
| 36 | K | A | -4.4000 | |
| 37 | D | A | -4.3271 | |
| 38 | P | A | -4.3411 | |
| 39 | E | A | -4.3184 | |
| 40 | K | A | -4.4770 | |
| 41 | A | A | -4.5274 | |
| 42 | K | A | -4.3069 | |
| 43 | E | A | -4.0540 | |
| 44 | A | A | 0.0000 | |
| 45 | A | A | -3.0244 | |
| 46 | A | A | -2.7376 | |
| 47 | K | A | -2.9553 | |
| 48 | L | A | 0.0000 | |
| 49 | E | A | -3.2242 | |
| 50 | E | A | -3.0240 | |
| 51 | L | A | -2.1765 | |
| 52 | L | A | -1.8446 | |
| 53 | A | A | -2.3006 | |
| 54 | E | A | -2.6032 | |
| 55 | F | A | -2.4455 | |
| 56 | R | A | -2.9058 | |
| 57 | K | A | -3.3276 | |
| 58 | L | A | -2.5500 | |
| 59 | A | A | -2.5677 | |
| 60 | K | A | -3.4825 | |
| 61 | E | A | -2.7199 | |
| 62 | L | A | -2.4010 | |
| 63 | A | A | -1.8531 | |
| 64 | K | A | -2.8529 | |
| 65 | L | A | -1.7355 | |
| 66 | A | A | -1.6881 | |
| 67 | K | A | -2.2089 | |
| 68 | S | A | -1.2716 |