| Chain sequence(s) |
A: MRVLYLLFSFLFIFLMPLPGVFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKPEAAKRVKVKSMSKGPGPGSVIPMLMSFGPGPGHLSFLTFSWAAYTPSIQAIVPLLVPEEGPGPGMWIFLLSNKLSGHSVGPGPGKGEVVVNGRIAYVPQGPGPGPEEELVKANSWNQFLQSGKKVSEYARKKLAATERTYGLRFKDQRVHVVSKSERVKMPKKKKEEDIRKLVTMYPDNITIAEERKKRLSFFTGFDSVEH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:29)
[INFO] Main: Simulation completed successfully. (00:04:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3815 | |
| 2 | R | A | 0.5371 | |
| 3 | V | A | 2.8483 | |
| 4 | L | A | 3.5207 | |
| 5 | Y | A | 3.5632 | |
| 6 | L | A | 3.5965 | |
| 7 | L | A | 4.4118 | |
| 8 | F | A | 5.3173 | |
| 9 | S | A | 4.7289 | |
| 10 | F | A | 5.3989 | |
| 11 | L | A | 5.4636 | |
| 12 | F | A | 5.8088 | |
| 13 | I | A | 5.7526 | |
| 14 | F | A | 5.4951 | |
| 15 | L | A | 4.6686 | |
| 16 | M | A | 3.5380 | |
| 17 | P | A | 2.3518 | |
| 18 | L | A | 2.7373 | |
| 19 | P | A | 0.9293 | |
| 20 | G | A | 0.9932 | |
| 21 | V | A | 2.5419 | |
| 22 | F | A | 2.5085 | |
| 23 | G | A | 0.7468 | |
| 24 | G | A | 0.0570 | |
| 25 | I | A | -0.0015 | |
| 26 | G | A | -0.7211 | |
| 27 | D | A | -0.5901 | |
| 28 | P | A | 0.4671 | |
| 29 | V | A | 1.3190 | |
| 30 | T | A | 0.0875 | |
| 31 | C | A | 0.0000 | |
| 32 | L | A | 1.1927 | |
| 33 | K | A | -0.5783 | |
| 34 | S | A | -0.2358 | |
| 35 | G | A | -0.6789 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.5547 | |
| 38 | C | A | 0.9263 | |
| 39 | H | A | 0.4670 | |
| 40 | P | A | 1.0207 | |
| 41 | V | A | 2.1793 | |
| 42 | F | A | 1.9389 | |
| 43 | C | A | -0.2709 | |
| 44 | P | A | -1.3825 | |
| 45 | R | A | -2.8173 | |
| 46 | R | A | -3.4159 | |
| 47 | Y | A | -2.8146 | |
| 48 | K | A | -3.0300 | |
| 49 | Q | A | -1.7609 | |
| 50 | I | A | -0.7385 | |
| 51 | G | A | -0.9367 | |
| 52 | T | A | -0.8068 | |
| 53 | C | A | 0.0000 | |
| 54 | G | A | -0.3070 | |
| 55 | L | A | 0.7013 | |
| 56 | P | A | 0.2481 | |
| 57 | G | A | 0.3660 | |
| 58 | T | A | 0.4569 | |
| 59 | K | A | -0.1966 | |
| 60 | C | A | 0.0000 | |
| 61 | C | A | 0.0000 | |
| 62 | K | A | -2.2419 | |
| 63 | K | A | -3.3228 | |
| 64 | P | A | -2.6605 | |
| 65 | E | A | -2.6337 | |
| 66 | A | A | -1.8221 | |
| 67 | A | A | -1.6049 | |
| 68 | K | A | -2.6022 | |
| 69 | R | A | -2.0326 | |
| 70 | V | A | -0.1643 | |
| 71 | K | A | -1.3497 | |
| 72 | V | A | 0.4605 | |
| 73 | K | A | -0.9276 | |
| 74 | S | A | -0.5081 | |
| 75 | M | A | 0.1290 | |
| 76 | S | A | -0.9631 | |
| 77 | K | A | -1.8947 | |
| 78 | G | A | -1.5120 | |
| 79 | P | A | -1.2505 | |
| 80 | G | A | -1.1203 | |
| 81 | P | A | -0.6490 | |
| 82 | G | A | -0.2330 | |
| 83 | S | A | 0.8807 | |
| 84 | V | A | 2.5713 | |
| 85 | I | A | 3.0991 | |
| 86 | P | A | 2.2067 | |
| 87 | M | A | 2.6777 | |
| 88 | L | A | 2.8884 | |
| 89 | M | A | 2.3220 | |
| 90 | S | A | 1.6207 | |
| 91 | F | A | 1.8938 | |
| 92 | G | A | 0.3109 | |
| 93 | P | A | -0.3078 | |
| 94 | G | A | -0.8190 | |
| 95 | P | A | -0.9726 | |
| 96 | G | A | -0.8532 | |
| 97 | H | A | -0.4212 | |
| 98 | L | A | 1.4904 | |
| 99 | S | A | 1.5317 | |
| 100 | F | A | 3.0742 | |
| 101 | L | A | 3.1412 | |
| 102 | T | A | 2.2599 | |
| 103 | F | A | 2.8360 | |
| 104 | S | A | 1.5162 | |
| 105 | W | A | 1.8705 | |
| 106 | A | A | 1.1753 | |
| 107 | A | A | 0.9650 | |
| 108 | Y | A | 1.4581 | |
| 109 | T | A | 0.7131 | |
| 110 | P | A | 0.2865 | |
| 111 | S | A | 0.4210 | |
| 112 | I | A | 1.5195 | |
| 113 | Q | A | 0.4722 | |
| 114 | A | A | 1.4312 | |
| 115 | I | A | 2.9918 | |
| 116 | V | A | 3.0649 | |
| 117 | P | A | 2.5242 | |
| 118 | L | A | 3.3653 | |
| 119 | L | A | 3.0275 | |
| 120 | V | A | 2.1402 | |
| 121 | P | A | -0.2236 | |
| 122 | E | A | -2.4094 | |
| 123 | E | A | -2.9103 | |
| 124 | G | A | -2.0952 | |
| 125 | P | A | -1.3068 | |
| 126 | G | A | -0.9358 | |
| 127 | P | A | -0.0618 | |
| 128 | G | A | 0.6868 | |
| 129 | M | A | 2.1334 | |
| 130 | W | A | 3.2352 | |
| 131 | I | A | 4.2115 | |
| 132 | F | A | 4.0617 | |
| 133 | L | A | 3.2118 | |
| 134 | L | A | 2.7689 | |
| 135 | S | A | 1.2292 | |
| 136 | N | A | -0.7472 | |
| 137 | K | A | -1.1961 | |
| 138 | L | A | 0.2016 | |
| 139 | S | A | -0.7765 | |
| 140 | G | A | -0.9016 | |
| 141 | H | A | -0.6880 | |
| 142 | S | A | -0.1343 | |
| 143 | V | A | 0.9753 | |
| 144 | G | A | -0.0227 | |
| 145 | P | A | -0.5144 | |
| 146 | G | A | -0.9775 | |
| 147 | P | A | -1.1806 | |
| 148 | G | A | -2.0649 | |
| 149 | K | A | -2.2729 | |
| 150 | G | A | -1.4660 | |
| 151 | E | A | -0.4055 | |
| 152 | V | A | 1.4844 | |
| 153 | V | A | 2.0894 | |
| 154 | V | A | 1.2175 | |
| 155 | N | A | -0.6802 | |
| 156 | G | A | -0.6128 | |
| 157 | R | A | -0.6124 | |
| 158 | I | A | 1.6052 | |
| 159 | A | A | 1.7023 | |
| 160 | Y | A | 1.7151 | |
| 161 | V | A | 1.4210 | |
| 162 | P | A | -0.1791 | |
| 163 | Q | A | -1.4483 | |
| 164 | G | A | -1.1026 | |
| 165 | P | A | -1.0717 | |
| 166 | G | A | -1.0929 | |
| 167 | P | A | -1.6602 | |
| 168 | G | A | -1.6246 | |
| 169 | P | A | -1.6689 | |
| 170 | E | A | -2.4425 | |
| 171 | E | A | -2.3654 | |
| 172 | E | A | -2.5055 | |
| 173 | L | A | -0.3437 | |
| 174 | V | A | 0.0006 | |
| 175 | K | A | -1.8036 | |
| 176 | A | A | -1.1038 | |
| 177 | N | A | -1.2641 | |
| 178 | S | A | -0.2523 | |
| 179 | W | A | 0.2323 | |
| 180 | N | A | -1.2341 | |
| 181 | Q | A | -0.9405 | |
| 182 | F | A | 1.0634 | |
| 183 | L | A | 0.8727 | |
| 184 | Q | A | -0.9028 | |
| 185 | S | A | -0.8553 | |
| 186 | G | A | -1.3114 | |
| 187 | K | A | -1.9202 | |
| 188 | K | A | -2.1052 | |
| 189 | V | A | -0.2530 | |
| 190 | S | A | -1.0299 | |
| 191 | E | A | -2.3523 | |
| 192 | Y | A | -0.7715 | |
| 193 | A | A | -1.2275 | |
| 194 | R | A | -2.6541 | |
| 195 | K | A | -3.0539 | |
| 196 | K | A | -2.5681 | |
| 197 | L | A | -1.1543 | |
| 198 | A | A | -1.8374 | |
| 199 | A | A | -1.6690 | |
| 200 | T | A | -1.0750 | |
| 201 | E | A | -1.2864 | |
| 202 | R | A | -1.8943 | |
| 203 | T | A | -0.4259 | |
| 204 | Y | A | 0.4357 | |
| 205 | G | A | -0.2660 | |
| 206 | L | A | 0.4199 | |
| 207 | R | A | -1.3906 | |
| 208 | F | A | -0.7722 | |
| 209 | K | A | -2.5943 | |
| 210 | D | A | -3.2195 | |
| 211 | Q | A | -2.7153 | |
| 212 | R | A | -2.0516 | |
| 213 | V | A | 0.7930 | |
| 214 | H | A | 0.6061 | |
| 215 | V | A | 2.1648 | |
| 216 | V | A | 2.0110 | |
| 217 | S | A | -0.2524 | |
| 218 | K | A | -1.9235 | |
| 219 | S | A | -2.0169 | |
| 220 | E | A | -3.0163 | |
| 221 | R | A | -2.4964 | |
| 222 | V | A | -0.3613 | |
| 223 | K | A | -1.5697 | |
| 224 | M | A | -1.0526 | |
| 225 | P | A | -1.8172 | |
| 226 | K | A | -3.2691 | |
| 227 | K | A | -3.8508 | |
| 228 | K | A | -4.3173 | |
| 229 | K | A | -4.8636 | |
| 230 | E | A | -4.9096 | |
| 231 | E | A | -4.6708 | |
| 232 | D | A | -3.7982 | |
| 233 | I | A | -2.6200 | |
| 234 | R | A | -3.5351 | |
| 235 | K | A | -2.5796 | |
| 236 | L | A | -0.1278 | |
| 237 | V | A | 0.0418 | |
| 238 | T | A | -0.0477 | |
| 239 | M | A | 1.0108 | |
| 240 | Y | A | 1.0474 | |
| 241 | P | A | -0.2110 | |
| 242 | D | A | -1.8065 | |
| 243 | N | A | -1.3126 | |
| 244 | I | A | 0.5576 | |
| 245 | T | A | 0.5421 | |
| 246 | I | A | 1.6517 | |
| 247 | A | A | 0.1558 | |
| 248 | E | A | -2.6692 | |
| 249 | E | A | -4.0278 | |
| 250 | R | A | -4.6041 | |
| 251 | K | A | -4.3103 | |
| 252 | K | A | -3.8254 | |
| 253 | R | A | -2.7902 | |
| 254 | L | A | -0.1275 | |
| 255 | S | A | 0.9134 | |
| 256 | F | A | 2.9204 | |
| 257 | F | A | 3.3655 | |
| 258 | T | A | 1.4993 | |
| 259 | G | A | 0.9723 | |
| 260 | F | A | 1.3619 | |
| 261 | D | A | -0.7800 | |
| 262 | S | A | -0.3415 | |
| 263 | V | A | 0.3055 | |
| 264 | E | A | -1.7260 | |
| 265 | H | A | -1.4403 |