| Chain sequence(s) |
E: SVLTQPPSASGTPGQRVTISCSGSSSNIETNYVSWYQQFPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAEYYCGTWDDNSWVFGGGTKLTV
D: QLQLQESGPGLVKPSETLSLTCTVSGASIDRSTYYWGWIRQPPGKGLEWIANIYYNGRAVYSPSLKSRVTISVDTSKNQFSLKVRSLTAADTAVYYCATRWNYFFDFDYWGRGTLVTV input PDB |
| Selected Chain(s) | D,E |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | D | -1.6285 | |
| 2 | L | D | 0.0000 | |
| 3 | Q | D | -1.9667 | |
| 4 | L | D | 0.0000 | |
| 5 | Q | D | -2.1721 | |
| 6 | E | D | -1.4140 | |
| 7 | S | D | -0.7563 | |
| 8 | G | D | -0.2733 | |
| 9 | P | D | 0.1102 | |
| 11 | G | D | 0.5002 | |
| 12 | L | D | 1.1871 | |
| 13 | V | D | 0.0000 | |
| 14 | K | D | -1.7044 | |
| 15 | P | D | -1.6663 | |
| 16 | S | D | -1.6447 | |
| 17 | E | D | -2.2900 | |
| 18 | T | D | -2.0530 | |
| 19 | L | D | 0.0000 | |
| 20 | S | D | -0.9737 | |
| 21 | L | D | 0.0000 | |
| 22 | T | D | -0.5694 | |
| 23 | C | D | 0.0000 | |
| 24 | T | D | -1.2705 | |
| 25 | V | D | 0.0000 | |
| 26 | S | D | -1.2114 | |
| 27 | G | D | -1.2399 | |
| 28 | A | D | -1.0280 | |
| 29 | S | D | -1.3361 | |
| 30 | I | D | 0.0000 | |
| 31 | D | D | -2.8155 | |
| 34 | R | D | -2.8318 | |
| 35 | S | D | -1.4932 | |
| 36 | T | D | 0.0000 | |
| 37 | Y | D | 0.1554 | |
| 38 | Y | D | 0.0000 | |
| 39 | W | D | 0.0000 | |
| 40 | G | D | 0.0000 | |
| 41 | W | D | 0.0000 | |
| 42 | I | D | 0.0000 | |
| 43 | R | D | 0.0000 | |
| 44 | Q | D | 0.0000 | |
| 45 | P | D | -0.8325 | |
| 46 | P | D | -0.9765 | |
| 47 | G | D | -1.5382 | |
| 48 | K | D | -2.2790 | |
| 49 | G | D | -1.5042 | |
| 50 | L | D | 0.0000 | |
| 51 | E | D | -1.0771 | |
| 52 | W | D | 0.0000 | |
| 53 | I | D | 0.0000 | |
| 54 | A | D | 0.0000 | |
| 55 | N | D | 0.0000 | |
| 56 | I | D | 0.0000 | |
| 57 | Y | D | -1.0217 | |
| 58 | Y | D | -1.6308 | |
| 59 | N | D | -2.3619 | |
| 63 | G | D | -1.8340 | |
| 64 | R | D | -2.2228 | |
| 65 | A | D | -0.8874 | |
| 66 | V | D | -0.5716 | |
| 67 | Y | D | -0.5388 | |
| 68 | S | D | 0.0000 | |
| 69 | P | D | -0.9156 | |
| 70 | S | D | -0.8935 | |
| 71 | L | D | 0.0000 | |
| 72 | K | D | -2.0102 | |
| 74 | S | D | -1.6478 | |
| 75 | R | D | -2.0193 | |
| 76 | V | D | 0.0000 | |
| 77 | T | D | -1.0171 | |
| 78 | I | D | 0.0000 | |
| 79 | S | D | -0.5995 | |
| 80 | V | D | -0.8166 | |
| 81 | D | D | -1.3482 | |
| 82 | T | D | -1.6225 | |
| 83 | S | D | -1.3883 | |
| 84 | K | D | -2.2126 | |
| 85 | N | D | -1.7225 | |
| 86 | Q | D | -1.3694 | |
| 87 | F | D | 0.0000 | |
| 88 | S | D | -0.4535 | |
| 89 | L | D | 0.0000 | |
| 90 | K | D | -1.4014 | |
| 91 | V | D | 0.0000 | |
| 92 | R | D | -2.6902 | |
| 93 | S | D | -1.7700 | |
| 94 | L | D | 0.0000 | |
| 95 | T | D | -0.4708 | |
| 96 | A | D | -0.0119 | |
| 97 | A | D | 0.1522 | |
| 98 | D | D | 0.0000 | |
| 99 | T | D | 0.5372 | |
| 100 | A | D | 0.0000 | |
| 101 | V | D | 0.2887 | |
| 102 | Y | D | 0.0000 | |
| 103 | Y | D | 0.0000 | |
| 104 | C | D | 0.0000 | |
| 105 | A | D | 0.0000 | |
| 106 | T | D | 0.0000 | |
| 107 | R | D | 0.4452 | |
| 108 | W | D | 0.6750 | |
| 109 | N | D | 0.8344 | |
| 110 | Y | D | 2.0233 | |
| 112 | F | D | 2.0074 | |
| 113 | F | D | 1.0649 | |
| 114 | D | D | 0.0000 | |
| 115 | F | D | 0.0000 | |
| 116 | D | D | -0.0925 | |
| 117 | Y | D | -0.3595 | |
| 118 | W | D | -0.8557 | |
| 119 | G | D | 0.0000 | |
| 120 | R | D | -2.1644 | |
| 121 | G | D | 0.0000 | |
| 122 | T | D | -0.2630 | |
| 123 | L | D | 0.9353 | |
| 124 | V | D | 0.0000 | |
| 125 | T | D | 0.5846 | |
| 126 | V | D | 0.2099 | |
| 2 | S | E | 0.5400 | |
| 3 | V | E | 1.5567 | |
| 4 | L | E | 0.0000 | |
| 5 | T | E | 0.1643 | |
| 6 | Q | E | 0.0000 | |
| 7 | P | E | -0.5290 | |
| 8 | P | E | -0.8872 | |
| 9 | S | E | -0.7774 | |
| 11 | A | E | -0.3274 | |
| 12 | S | E | -0.1307 | |
| 13 | G | E | -0.6572 | |
| 14 | T | E | -0.7828 | |
| 15 | P | E | -1.3010 | |
| 16 | G | E | -1.8740 | |
| 17 | Q | E | -2.3768 | |
| 18 | R | E | -2.6558 | |
| 19 | V | E | 0.0000 | |
| 20 | T | E | -0.6171 | |
| 21 | I | E | 0.0000 | |
| 22 | S | E | -0.3985 | |
| 23 | C | E | 0.0000 | |
| 24 | S | E | -0.3224 | |
| 25 | G | E | -0.4145 | |
| 26 | S | E | -0.3660 | |
| 27 | S | E | -0.9710 | |
| 28 | S | E | -1.0689 | |
| 29 | N | E | 0.0000 | |
| 30 | I | E | 0.0000 | |
| 35 | E | E | -1.5318 | |
| 36 | T | E | -0.8008 | |
| 37 | N | E | -0.8380 | |
| 38 | Y | E | -0.3170 | |
| 39 | V | E | 0.0000 | |
| 40 | S | E | 0.0000 | |
| 41 | W | E | 0.0000 | |
| 42 | Y | E | 0.0000 | |
| 43 | Q | E | 0.0000 | |
| 44 | Q | E | 0.0000 | |
| 45 | F | E | 0.1168 | |
| 46 | P | E | -0.2785 | |
| 47 | G | E | -0.3910 | |
| 48 | T | E | -0.5405 | |
| 49 | A | E | -0.6846 | |
| 50 | P | E | 0.0000 | |
| 51 | K | E | -1.5061 | |
| 52 | L | E | 0.0000 | |
| 53 | L | E | 0.0000 | |
| 54 | I | E | 0.0000 | |
| 55 | Y | E | -0.5070 | |
| 56 | R | E | -1.4212 | |
| 57 | N | E | -1.9449 | |
| 65 | N | E | -2.5404 | |
| 66 | Q | E | -2.3124 | |
| 67 | R | E | -2.1586 | |
| 68 | P | E | -0.8220 | |
| 69 | S | E | -0.6831 | |
| 70 | G | E | -0.8312 | |
| 71 | V | E | -0.7736 | |
| 72 | P | E | -1.3111 | |
| 74 | D | E | -2.2201 | |
| 75 | R | E | -1.5785 | |
| 76 | F | E | 0.0000 | |
| 77 | S | E | -1.3181 | |
| 78 | G | E | -1.2884 | |
| 79 | S | E | -1.3288 | |
| 80 | K | E | -1.2497 | |
| 83 | S | E | -0.9435 | |
| 84 | G | E | -1.0956 | |
| 85 | T | E | -1.0429 | |
| 86 | S | E | -0.8455 | |
| 87 | A | E | 0.0000 | |
| 88 | S | E | -0.5037 | |
| 89 | L | E | 0.0000 | |
| 90 | A | E | -0.6604 | |
| 91 | I | E | 0.0000 | |
| 92 | S | E | -1.9179 | |
| 93 | G | E | -1.6889 | |
| 94 | L | E | 0.0000 | |
| 95 | R | E | -2.1143 | |
| 96 | S | E | -1.7006 | |
| 97 | E | E | -2.2665 | |
| 98 | D | E | 0.0000 | |
| 99 | E | E | -1.4341 | |
| 100 | A | E | 0.0000 | |
| 101 | E | E | -0.6841 | |
| 102 | Y | E | 0.0000 | |
| 103 | Y | E | 0.0000 | |
| 104 | C | E | 0.0000 | |
| 105 | G | E | 0.0000 | |
| 106 | T | E | 0.0000 | |
| 107 | W | E | -0.7985 | |
| 108 | D | E | -1.7379 | |
| 109 | D | E | -2.6140 | |
| 114 | N | E | -2.1136 | |
| 115 | S | E | -1.2330 | |
| 116 | W | E | 0.0000 | |
| 117 | V | E | 0.1963 | |
| 118 | F | E | 0.0000 | |
| 119 | G | E | 0.0000 | |
| 120 | G | E | -0.6178 | |
| 121 | G | E | -1.0569 | |
| 122 | T | E | 0.0000 | |
| 123 | K | E | -1.1253 | |
| 124 | L | E | 0.0000 | |
| 125 | T | E | -0.0190 | |
| 126 | V | E | 0.3647 |