| Chain sequence(s) |
A: MSHHHHHHSGSEEARKEEEEVMIKRAIYHANKMFPNSTLVEKWEEYKSMEYEELIKKLEEEVKKLSETLPKEVGEVRLNNALGWIDHARWWVFEHPRNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:20)
[INFO] Main: Simulation completed successfully. (00:05:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5650 | |
| 2 | S | A | -0.6105 | |
| 3 | H | A | -1.6809 | |
| 4 | H | A | -2.2756 | |
| 5 | H | A | -2.7460 | |
| 6 | H | A | -2.7778 | |
| 7 | H | A | -2.6202 | |
| 8 | H | A | -2.6251 | |
| 9 | S | A | -2.2482 | |
| 10 | G | A | -2.2483 | |
| 11 | S | A | -2.5697 | |
| 12 | E | A | -3.0178 | |
| 13 | E | A | -3.5859 | |
| 14 | A | A | -2.7588 | |
| 15 | R | A | -3.3016 | |
| 16 | K | A | -3.7006 | |
| 17 | E | A | -3.7923 | |
| 18 | E | A | -2.9176 | |
| 19 | E | A | 0.0000 | |
| 20 | E | A | -2.7447 | |
| 21 | V | A | -1.7197 | |
| 22 | M | A | -1.3681 | |
| 23 | I | A | 0.0000 | |
| 24 | K | A | -1.7469 | |
| 25 | R | A | -1.5682 | |
| 26 | A | A | 0.0000 | |
| 27 | I | A | 0.0000 | |
| 28 | Y | A | -0.3374 | |
| 29 | H | A | -0.8683 | |
| 30 | A | A | 0.0000 | |
| 31 | N | A | -1.1104 | |
| 32 | K | A | -1.7206 | |
| 33 | M | A | -0.9131 | |
| 34 | F | A | 0.0000 | |
| 35 | P | A | -1.1559 | |
| 36 | N | A | -1.6087 | |
| 37 | S | A | 0.0000 | |
| 38 | T | A | -1.1299 | |
| 39 | L | A | 0.0000 | |
| 40 | V | A | -0.8380 | |
| 41 | E | A | -2.2884 | |
| 42 | K | A | -2.7957 | |
| 43 | W | A | -2.7217 | |
| 44 | E | A | -3.6708 | |
| 45 | E | A | -3.6857 | |
| 46 | Y | A | 0.0000 | |
| 47 | K | A | -3.4491 | |
| 48 | S | A | -2.1880 | |
| 49 | M | A | -2.4746 | |
| 50 | E | A | -2.7696 | |
| 51 | Y | A | -2.3861 | |
| 52 | E | A | -2.7639 | |
| 53 | E | A | -3.3667 | |
| 54 | L | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | -3.7305 | |
| 57 | K | A | -3.2421 | |
| 58 | L | A | 0.0000 | |
| 59 | E | A | -3.3341 | |
| 60 | E | A | -3.5665 | |
| 61 | E | A | -2.7543 | |
| 62 | V | A | 0.0000 | |
| 63 | K | A | -3.2932 | |
| 64 | K | A | -2.9953 | |
| 65 | L | A | -1.8327 | |
| 66 | S | A | 0.0000 | |
| 67 | E | A | -2.8914 | |
| 68 | T | A | -1.3942 | |
| 69 | L | A | -1.4309 | |
| 70 | P | A | -1.8044 | |
| 71 | K | A | -2.9992 | |
| 72 | E | A | -2.4218 | |
| 73 | V | A | -0.8455 | |
| 74 | G | A | 0.0000 | |
| 75 | E | A | -2.4637 | |
| 76 | V | A | -0.2207 | |
| 77 | R | A | -1.1932 | |
| 78 | L | A | -1.6910 | |
| 79 | N | A | -1.6194 | |
| 80 | N | A | -1.5517 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | -1.3530 | |
| 83 | G | A | -1.5357 | |
| 84 | W | A | -0.9432 | |
| 85 | I | A | 0.0000 | |
| 86 | D | A | -2.2140 | |
| 87 | H | A | -1.5647 | |
| 88 | A | A | 0.0000 | |
| 89 | R | A | -1.7748 | |
| 90 | W | A | -0.8538 | |
| 91 | W | A | -0.9178 | |
| 92 | V | A | -1.1140 | |
| 93 | F | A | -0.5094 | |
| 94 | E | A | -1.8143 | |
| 95 | H | A | -1.5920 | |
| 96 | P | A | -1.8994 | |
| 97 | R | A | -2.9841 | |
| 98 | N | A | -2.4458 | |
| 99 | S | A | -1.6080 |