Project name: 1W08

Status: done

Started: 2024-11-21 06:00:53
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Chain sequence(s) A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:26)
Show buried residues

Minimal score value
-4.211
Maximal score value
0.8639
Average score
-1.182
Total score value
-153.6549

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.5014
2 V A -0.3099
3 F A 0.0000
4 E A -2.1325
5 R A -1.9067
6 C A -1.7600
7 E A -2.1760
8 L A 0.0000
9 A A 0.0000
10 R A -2.7472
11 T A -1.8032
12 L A 0.0000
13 K A -2.7078
14 R A -2.6410
15 L A -1.2399
16 G A -1.5769
17 M A 0.0000
18 D A -2.6727
19 G A -2.0162
20 Y A -1.8813
21 R A -2.8866
22 G A -1.7798
23 I A 0.0000
24 S A -1.5148
25 L A 0.0000
26 A A 0.0000
27 N A -1.3311
28 W A 0.0000
29 M A 0.0000
30 C A 0.0000
31 L A 0.0000
32 A A 0.0000
33 K A -1.1682
34 W A -0.4771
35 E A -0.5024
36 S A -0.7179
37 G A -0.6603
38 Y A 0.0000
39 N A -1.5014
40 T A 0.0000
41 R A -2.4879
42 A A -1.3670
43 T A -0.8432
44 N A -0.7909
45 Y A -0.0908
46 N A -1.1131
47 A A -1.0305
48 G A -1.2439
49 D A -1.9932
50 R A -2.7513
51 S A 0.0000
52 T A -1.2589
53 D A -0.6967
54 Y A -0.4813
55 G A 0.0000
56 I A 0.0000
57 F A 0.0000
58 Q A 0.0000
59 I A 0.0000
60 N A -0.8412
61 S A 0.0000
62 R A -2.1322
63 Y A 0.3021
64 W A -0.2613
65 C A 0.0000
66 N A -2.3179
67 D A -2.5404
68 G A -2.3833
69 K A -3.2671
70 N A -2.5698
71 P A -1.4979
72 G A -0.8503
73 A A -0.7445
74 V A 0.8639
75 N A -0.2692
76 A A 0.0000
77 C A -0.5457
78 H A -0.9570
79 L A -1.0175
80 S A -1.2370
81 C A 0.0000
82 S A -0.8472
83 A A -0.9716
84 L A 0.0000
85 L A -1.9425
86 Q A -3.0083
87 D A -3.4350
88 N A -2.8147
89 I A 0.0000
90 A A -1.0598
91 D A -1.4482
92 A A 0.0000
93 V A 0.0000
94 A A -0.6025
95 C A 0.0000
96 A A 0.0000
97 K A -1.7664
98 R A -2.0013
99 V A 0.0000
100 V A 0.0000
101 R A -3.4820
102 D A -3.1934
103 P A -2.2280
104 Q A -2.2685
105 G A -2.5637
106 I A 0.0000
107 R A -2.1311
108 A A -0.9168
109 W A 0.0000
110 V A 0.5451
111 A A -0.4928
112 W A 0.0000
113 R A -2.2389
114 N A -2.4109
115 R A -2.6799
116 C A 0.0000
117 Q A -3.0134
118 N A -3.2361
119 R A -4.2110
120 D A -3.7848
121 V A -2.8377
122 R A -3.2197
123 Q A -2.4632
124 Y A -1.7221
125 V A 0.0000
126 Q A -2.1468
127 G A -1.3601
128 C A 0.0000
129 G A -0.4722
130 V A -0.2021
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Laboratory of Theory of Biopolymers 2018