| Chain sequence(s) |
A: KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKNPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.5014 | |
| 2 | V | A | -0.3099 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -2.1325 | |
| 5 | R | A | -1.9067 | |
| 6 | C | A | -1.7600 | |
| 7 | E | A | -2.1760 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | R | A | -2.7472 | |
| 11 | T | A | -1.8032 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.7078 | |
| 14 | R | A | -2.6410 | |
| 15 | L | A | -1.2399 | |
| 16 | G | A | -1.5769 | |
| 17 | M | A | 0.0000 | |
| 18 | D | A | -2.6727 | |
| 19 | G | A | -2.0162 | |
| 20 | Y | A | -1.8813 | |
| 21 | R | A | -2.8866 | |
| 22 | G | A | -1.7798 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -1.5148 | |
| 25 | L | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | N | A | -1.3311 | |
| 28 | W | A | 0.0000 | |
| 29 | M | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.1682 | |
| 34 | W | A | -0.4771 | |
| 35 | E | A | -0.5024 | |
| 36 | S | A | -0.7179 | |
| 37 | G | A | -0.6603 | |
| 38 | Y | A | 0.0000 | |
| 39 | N | A | -1.5014 | |
| 40 | T | A | 0.0000 | |
| 41 | R | A | -2.4879 | |
| 42 | A | A | -1.3670 | |
| 43 | T | A | -0.8432 | |
| 44 | N | A | -0.7909 | |
| 45 | Y | A | -0.0908 | |
| 46 | N | A | -1.1131 | |
| 47 | A | A | -1.0305 | |
| 48 | G | A | -1.2439 | |
| 49 | D | A | -1.9932 | |
| 50 | R | A | -2.7513 | |
| 51 | S | A | 0.0000 | |
| 52 | T | A | -1.2589 | |
| 53 | D | A | -0.6967 | |
| 54 | Y | A | -0.4813 | |
| 55 | G | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | F | A | 0.0000 | |
| 58 | Q | A | 0.0000 | |
| 59 | I | A | 0.0000 | |
| 60 | N | A | -0.8412 | |
| 61 | S | A | 0.0000 | |
| 62 | R | A | -2.1322 | |
| 63 | Y | A | 0.3021 | |
| 64 | W | A | -0.2613 | |
| 65 | C | A | 0.0000 | |
| 66 | N | A | -2.3179 | |
| 67 | D | A | -2.5404 | |
| 68 | G | A | -2.3833 | |
| 69 | K | A | -3.2671 | |
| 70 | N | A | -2.5698 | |
| 71 | P | A | -1.4979 | |
| 72 | G | A | -0.8503 | |
| 73 | A | A | -0.7445 | |
| 74 | V | A | 0.8639 | |
| 75 | N | A | -0.2692 | |
| 76 | A | A | 0.0000 | |
| 77 | C | A | -0.5457 | |
| 78 | H | A | -0.9570 | |
| 79 | L | A | -1.0175 | |
| 80 | S | A | -1.2370 | |
| 81 | C | A | 0.0000 | |
| 82 | S | A | -0.8472 | |
| 83 | A | A | -0.9716 | |
| 84 | L | A | 0.0000 | |
| 85 | L | A | -1.9425 | |
| 86 | Q | A | -3.0083 | |
| 87 | D | A | -3.4350 | |
| 88 | N | A | -2.8147 | |
| 89 | I | A | 0.0000 | |
| 90 | A | A | -1.0598 | |
| 91 | D | A | -1.4482 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | A | A | -0.6025 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | K | A | -1.7664 | |
| 98 | R | A | -2.0013 | |
| 99 | V | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | R | A | -3.4820 | |
| 102 | D | A | -3.1934 | |
| 103 | P | A | -2.2280 | |
| 104 | Q | A | -2.2685 | |
| 105 | G | A | -2.5637 | |
| 106 | I | A | 0.0000 | |
| 107 | R | A | -2.1311 | |
| 108 | A | A | -0.9168 | |
| 109 | W | A | 0.0000 | |
| 110 | V | A | 0.5451 | |
| 111 | A | A | -0.4928 | |
| 112 | W | A | 0.0000 | |
| 113 | R | A | -2.2389 | |
| 114 | N | A | -2.4109 | |
| 115 | R | A | -2.6799 | |
| 116 | C | A | 0.0000 | |
| 117 | Q | A | -3.0134 | |
| 118 | N | A | -3.2361 | |
| 119 | R | A | -4.2110 | |
| 120 | D | A | -3.7848 | |
| 121 | V | A | -2.8377 | |
| 122 | R | A | -3.2197 | |
| 123 | Q | A | -2.4632 | |
| 124 | Y | A | -1.7221 | |
| 125 | V | A | 0.0000 | |
| 126 | Q | A | -2.1468 | |
| 127 | G | A | -1.3601 | |
| 128 | C | A | 0.0000 | |
| 129 | G | A | -0.4722 | |
| 130 | V | A | -0.2021 |