| Chain sequence(s) |
H: EVQLQESGPGLVKPSQTLSLTCTVSDGSVSRGGYYLTWIRQHPGKGLEWIGYIYYSGSTYFNPSLRSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARGIAVAPFDYWGQGTLVTVSS
L: EIVLTQSPATLSVSPGERATLSCRTSQSVRSNLAWYQQKPGQAPRLLIYAASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYTNWPFTFGPGTKVDIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.5999 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.3475 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.5012 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6992 | |
| 8 | G | H | -0.5377 | |
| 9 | P | H | -0.2648 | |
| 11 | G | H | 0.0287 | |
| 12 | L | H | 0.1482 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.6961 | |
| 15 | P | H | -1.2379 | |
| 16 | S | H | -1.2018 | |
| 17 | Q | H | -1.6231 | |
| 18 | T | H | -1.2525 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9187 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.5908 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.0760 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -2.1127 | |
| 27 | D | H | -2.6947 | |
| 28 | G | H | -2.0025 | |
| 29 | S | H | -1.4246 | |
| 30 | V | H | 0.0000 | |
| 31 | S | H | -1.1356 | |
| 34 | R | H | -2.0079 | |
| 35 | G | H | -1.2750 | |
| 36 | G | H | -0.4852 | |
| 37 | Y | H | 0.1916 | |
| 38 | Y | H | 0.7135 | |
| 39 | L | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7301 | |
| 45 | H | H | -1.0065 | |
| 46 | P | H | -1.0160 | |
| 47 | G | H | -1.5200 | |
| 48 | K | H | -2.3062 | |
| 49 | G | H | -1.3250 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7800 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.6389 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.3358 | |
| 58 | Y | H | -0.0201 | |
| 59 | S | H | -0.1704 | |
| 63 | G | H | -0.4220 | |
| 64 | S | H | -0.0308 | |
| 65 | T | H | 0.4622 | |
| 66 | Y | H | 1.0569 | |
| 67 | F | H | 0.3439 | |
| 68 | N | H | 0.0000 | |
| 69 | P | H | -0.7088 | |
| 70 | S | H | -0.6470 | |
| 71 | L | H | 0.0000 | |
| 72 | R | H | -0.9079 | |
| 74 | S | H | -0.8474 | |
| 75 | R | H | -1.0939 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.6584 | |
| 78 | M | H | 0.0000 | |
| 79 | S | H | -0.4497 | |
| 80 | V | H | -0.5120 | |
| 81 | D | H | -1.3644 | |
| 82 | T | H | -1.0976 | |
| 83 | S | H | -1.3783 | |
| 84 | K | H | -2.2381 | |
| 85 | N | H | -1.7254 | |
| 86 | Q | H | -1.3431 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.6123 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.4986 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0196 | |
| 93 | S | H | -0.9528 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5374 | |
| 96 | A | H | -0.2111 | |
| 97 | A | H | -0.0059 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.1534 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4334 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | I | H | 1.2640 | |
| 109 | A | H | 1.2903 | |
| 110 | V | H | 1.8113 | |
| 113 | A | H | 1.1604 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2336 | |
| 117 | Y | H | -0.5083 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7274 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.0049 | |
| 123 | L | H | 0.8196 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1273 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5704 | |
| 128 | S | H | -0.6882 | |
| 1 | E | L | -1.8261 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7417 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.4076 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7015 | |
| 8 | P | L | -0.4041 | |
| 9 | A | L | -0.3866 | |
| 10 | T | L | -0.5648 | |
| 11 | L | L | -0.2291 | |
| 12 | S | L | -0.3491 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.0460 | |
| 15 | P | L | -1.3369 | |
| 16 | G | L | -1.7642 | |
| 17 | E | L | -2.3989 | |
| 18 | R | L | -2.6871 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5629 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9007 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3364 | |
| 25 | T | L | 0.0000 | |
| 26 | S | L | -1.0393 | |
| 27 | Q | L | -1.9399 | |
| 28 | S | L | -1.8760 | |
| 29 | V | L | 0.0000 | |
| 36 | R | L | -2.3952 | |
| 37 | S | L | -1.2854 | |
| 38 | N | L | -0.5415 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8119 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3819 | |
| 46 | P | L | -0.9438 | |
| 47 | G | L | -1.3467 | |
| 48 | Q | L | -2.0388 | |
| 49 | A | L | -1.3944 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.5932 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2328 | |
| 56 | A | L | -0.0880 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4517 | |
| 66 | T | L | -0.3764 | |
| 67 | R | L | -0.8653 | |
| 68 | A | L | -0.6051 | |
| 69 | T | L | -0.4683 | |
| 70 | G | L | -0.5343 | |
| 71 | I | L | -0.4611 | |
| 72 | P | L | -0.3190 | |
| 74 | A | L | -0.2902 | |
| 75 | R | L | -0.6813 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4756 | |
| 78 | G | L | -0.4148 | |
| 79 | S | L | -0.6670 | |
| 80 | G | L | -1.3400 | |
| 83 | S | L | -1.4352 | |
| 84 | G | L | -1.8937 | |
| 85 | T | L | -2.1083 | |
| 86 | E | L | -2.3133 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8044 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5950 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2725 | |
| 93 | S | L | -1.6686 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.5311 | |
| 96 | S | L | -0.8750 | |
| 97 | E | L | -1.4721 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2302 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3854 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | T | L | -0.8162 | |
| 109 | N | L | -1.5315 | |
| 114 | W | L | -0.7328 | |
| 115 | P | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.1492 | |
| 118 | F | L | 0.2828 | |
| 119 | G | L | 0.0000 | |
| 120 | P | L | -0.5775 | |
| 121 | G | L | -0.6824 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2210 | |
| 124 | V | L | 0.0000 | |
| 125 | D | L | -0.0262 | |
| 126 | I | L | 0.8747 | |
| 127 | K | L | -0.8939 |