Project name: Precemtabart

Status: done

Started: 2026-03-23 04:16:32
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Chain sequence(s) H: EVQLQESGPGLVKPSQTLSLTCTVSDGSVSRGGYYLTWIRQHPGKGLEWIGYIYYSGSTYFNPSLRSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARGIAVAPFDYWGQGTLVTVSS
L: EIVLTQSPATLSVSPGERATLSCRTSQSVRSNLAWYQQKPGQAPRLLIYAASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYTNWPFTFGPGTKVDIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-2.6947
Maximal score value
1.8113
Average score
-0.523
Total score value
-118.1872

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.5999
2 V H 0.0000
3 Q H -2.3475
4 L H 0.0000
5 Q H -1.5012
6 E H 0.0000
7 S H -0.6992
8 G H -0.5377
9 P H -0.2648
11 G H 0.0287
12 L H 0.1482
13 V H 0.0000
14 K H -1.6961
15 P H -1.2379
16 S H -1.2018
17 Q H -1.6231
18 T H -1.2525
19 L H 0.0000
20 S H -0.9187
21 L H 0.0000
22 T H -0.5908
23 C H 0.0000
24 T H -1.0760
25 V H 0.0000
26 S H -2.1127
27 D H -2.6947
28 G H -2.0025
29 S H -1.4246
30 V H 0.0000
31 S H -1.1356
34 R H -2.0079
35 G H -1.2750
36 G H -0.4852
37 Y H 0.1916
38 Y H 0.7135
39 L H 0.0000
40 T H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H -0.7301
45 H H -1.0065
46 P H -1.0160
47 G H -1.5200
48 K H -2.3062
49 G H -1.3250
50 L H 0.0000
51 E H -0.7800
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.6389
56 I H 0.0000
57 Y H 0.3358
58 Y H -0.0201
59 S H -0.1704
63 G H -0.4220
64 S H -0.0308
65 T H 0.4622
66 Y H 1.0569
67 F H 0.3439
68 N H 0.0000
69 P H -0.7088
70 S H -0.6470
71 L H 0.0000
72 R H -0.9079
74 S H -0.8474
75 R H -1.0939
76 V H 0.0000
77 T H -0.6584
78 M H 0.0000
79 S H -0.4497
80 V H -0.5120
81 D H -1.3644
82 T H -1.0976
83 S H -1.3783
84 K H -2.2381
85 N H -1.7254
86 Q H -1.3431
87 F H 0.0000
88 S H -0.6123
89 L H 0.0000
90 K H -1.4986
91 L H 0.0000
92 S H -1.0196
93 S H -0.9528
94 V H 0.0000
95 T H -0.5374
96 A H -0.2111
97 A H -0.0059
98 D H 0.0000
99 T H 0.1534
100 A H 0.0000
101 V H 0.4334
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 I H 1.2640
109 A H 1.2903
110 V H 1.8113
113 A H 1.1604
114 P H 0.0000
115 F H 0.0000
116 D H -0.2336
117 Y H -0.5083
118 W H 0.0000
119 G H 0.0000
120 Q H -1.7274
121 G H 0.0000
122 T H -0.0049
123 L H 0.8196
124 V H 0.0000
125 T H 0.1273
126 V H 0.0000
127 S H -0.5704
128 S H -0.6882
1 E L -1.8261
2 I L 0.0000
3 V L 0.7417
4 L L 0.0000
5 T L -0.4076
6 Q L 0.0000
7 S L -0.7015
8 P L -0.4041
9 A L -0.3866
10 T L -0.5648
11 L L -0.2291
12 S L -0.3491
13 V L 0.0000
14 S L -1.0460
15 P L -1.3369
16 G L -1.7642
17 E L -2.3989
18 R L -2.6871
19 A L 0.0000
20 T L -0.5629
21 L L 0.0000
22 S L -0.9007
23 C L 0.0000
24 R L -2.3364
25 T L 0.0000
26 S L -1.0393
27 Q L -1.9399
28 S L -1.8760
29 V L 0.0000
36 R L -2.3952
37 S L -1.2854
38 N L -0.5415
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8119
44 Q L 0.0000
45 K L -1.3819
46 P L -0.9438
47 G L -1.3467
48 Q L -2.0388
49 A L -1.3944
50 P L 0.0000
51 R L -1.5932
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2328
56 A L -0.0880
57 A L 0.0000
65 S L -0.4517
66 T L -0.3764
67 R L -0.8653
68 A L -0.6051
69 T L -0.4683
70 G L -0.5343
71 I L -0.4611
72 P L -0.3190
74 A L -0.2902
75 R L -0.6813
76 F L 0.0000
77 S L -0.4756
78 G L -0.4148
79 S L -0.6670
80 G L -1.3400
83 S L -1.4352
84 G L -1.8937
85 T L -2.1083
86 E L -2.3133
87 F L 0.0000
88 T L -0.8044
89 L L 0.0000
90 T L -0.5950
91 I L 0.0000
92 S L -1.2725
93 S L -1.6686
94 L L 0.0000
95 Q L -1.5311
96 S L -0.8750
97 E L -1.4721
98 D L 0.0000
99 F L -0.2302
100 A L 0.0000
101 V L -0.3854
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 T L -0.8162
109 N L -1.5315
114 W L -0.7328
115 P L 0.0000
116 F L 0.0000
117 T L -0.1492
118 F L 0.2828
119 G L 0.0000
120 P L -0.5775
121 G L -0.6824
122 T L 0.0000
123 K L -1.2210
124 V L 0.0000
125 D L -0.0262
126 I L 0.8747
127 K L -0.8939
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Laboratory of Theory of Biopolymers 2018