| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH D: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.2365 | |
| 2 | V | A | 4.6164 | |
| 3 | I | A | 3.1970 | |
| 4 | V | A | 1.7639 | |
| 5 | K | A | -1.5058 | |
| 6 | G | A | -2.0738 | |
| 7 | H | A | -1.9635 | |
| 1 | I | B | 4.9758 | |
| 2 | V | B | 4.8396 | |
| 3 | I | B | 3.4502 | |
| 4 | V | B | 1.3581 | |
| 5 | K | B | -1.5519 | |
| 6 | G | B | -2.2195 | |
| 7 | H | B | -2.6013 | |
| 1 | I | C | 5.1281 | |
| 2 | V | C | 5.1646 | |
| 3 | I | C | 3.6135 | |
| 4 | V | C | 1.5781 | |
| 5 | K | C | -1.5974 | |
| 6 | G | C | -2.2060 | |
| 7 | H | C | -2.5845 | |
| 1 | I | D | 4.5215 | |
| 2 | V | D | 5.0750 | |
| 3 | I | D | 4.3781 | |
| 4 | V | D | 2.1403 | |
| 5 | K | D | -1.3073 | |
| 6 | G | D | -1.8251 | |
| 7 | H | D | -2.1035 |