| Chain sequence(s) |
A: SSLFTFLCLAVFINGCLSQI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 1.1458 | |
| 2 | S | A | 1.4400 | |
| 3 | L | A | 2.9945 | |
| 4 | F | A | 3.2850 | |
| 5 | T | A | 2.4315 | |
| 6 | F | A | 3.2986 | |
| 7 | L | A | 3.7664 | |
| 8 | C | A | 3.2035 | |
| 9 | L | A | 3.6099 | |
| 10 | A | A | 0.0000 | |
| 11 | V | A | 3.2684 | |
| 12 | F | A | 3.7146 | |
| 13 | I | A | 3.0997 | |
| 14 | N | A | 0.9846 | |
| 15 | G | A | 0.3918 | |
| 16 | C | A | 1.5094 | |
| 17 | L | A | 1.6685 | |
| 18 | S | A | 0.1138 | |
| 19 | Q | A | -0.3832 | |
| 20 | I | A | 1.6048 |