Project name: rank_18

Status: done

Started: 2026-06-03 09:17:55
Settings
Chain sequence(s) B: SMSLEEKVIEKHRSYFENYARIHGGYKEGDKLEIYIEKGPWTDEKNKTQYYFVMIFVGDKHVLMSWWVPIE
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-3.6413
Maximal score value
1.2123
Average score
-1.043
Total score value
-74.0537

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B 0.0341
2 M B 0.0739
3 S B -0.2600
4 L B -0.1177
5 E B -1.3461
6 E B -2.1983
7 K B -2.5221
8 V B 0.0000
9 I B -2.2152
10 E B -3.5784
11 K B -3.3683
12 H B -2.2704
13 R B -2.3747
14 S B -1.0990
15 Y B -0.2714
16 F B 0.0000
17 E B -1.2941
18 N B -0.7726
19 Y B 0.0735
20 A B 0.0000
21 R B -1.2455
22 I B 0.6341
23 H B -0.4418
24 G B -0.9568
25 G B -1.0601
26 Y B 0.0000
27 K B -3.4817
28 E B -3.6413
29 G B -2.7088
30 D B -3.2213
31 K B -2.9979
32 L B -1.9709
33 E B -1.3055
34 I B 0.0314
35 Y B 0.8493
36 I B -0.1028
37 E B -1.7515
38 K B -2.0982
39 G B 0.0000
40 P B -0.1264
41 W B 0.6386
42 T B -0.4334
43 D B -1.9470
44 E B -3.4235
45 K B -3.6366
46 N B -3.2023
47 K B -2.8726
48 T B -1.1195
49 Q B 0.0000
50 Y B 0.2196
51 Y B 0.0000
52 F B 0.2992
53 V B 0.0000
54 M B 0.8499
55 I B 0.0000
56 F B -0.5578
57 V B -2.0198
58 G B -2.2584
59 D B -2.6027
60 K B -2.5405
61 H B -1.4378
62 V B 0.0000
63 L B 1.2123
64 M B 0.0000
65 S B 0.5139
66 W B 0.6109
67 W B 0.9400
68 V B 0.0000
69 P B -0.3273
70 I B -0.0431
71 E B -1.8133
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Laboratory of Theory of Biopolymers 2018