| Chain sequence(s) |
B: SMSLEEKVIEKHRSYFENYARIHGGYKEGDKLEIYIEKGPWTDEKNKTQYYFVMIFVGDKHVLMSWWVPIE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.0341 | |
| 2 | M | B | 0.0739 | |
| 3 | S | B | -0.2600 | |
| 4 | L | B | -0.1177 | |
| 5 | E | B | -1.3461 | |
| 6 | E | B | -2.1983 | |
| 7 | K | B | -2.5221 | |
| 8 | V | B | 0.0000 | |
| 9 | I | B | -2.2152 | |
| 10 | E | B | -3.5784 | |
| 11 | K | B | -3.3683 | |
| 12 | H | B | -2.2704 | |
| 13 | R | B | -2.3747 | |
| 14 | S | B | -1.0990 | |
| 15 | Y | B | -0.2714 | |
| 16 | F | B | 0.0000 | |
| 17 | E | B | -1.2941 | |
| 18 | N | B | -0.7726 | |
| 19 | Y | B | 0.0735 | |
| 20 | A | B | 0.0000 | |
| 21 | R | B | -1.2455 | |
| 22 | I | B | 0.6341 | |
| 23 | H | B | -0.4418 | |
| 24 | G | B | -0.9568 | |
| 25 | G | B | -1.0601 | |
| 26 | Y | B | 0.0000 | |
| 27 | K | B | -3.4817 | |
| 28 | E | B | -3.6413 | |
| 29 | G | B | -2.7088 | |
| 30 | D | B | -3.2213 | |
| 31 | K | B | -2.9979 | |
| 32 | L | B | -1.9709 | |
| 33 | E | B | -1.3055 | |
| 34 | I | B | 0.0314 | |
| 35 | Y | B | 0.8493 | |
| 36 | I | B | -0.1028 | |
| 37 | E | B | -1.7515 | |
| 38 | K | B | -2.0982 | |
| 39 | G | B | 0.0000 | |
| 40 | P | B | -0.1264 | |
| 41 | W | B | 0.6386 | |
| 42 | T | B | -0.4334 | |
| 43 | D | B | -1.9470 | |
| 44 | E | B | -3.4235 | |
| 45 | K | B | -3.6366 | |
| 46 | N | B | -3.2023 | |
| 47 | K | B | -2.8726 | |
| 48 | T | B | -1.1195 | |
| 49 | Q | B | 0.0000 | |
| 50 | Y | B | 0.2196 | |
| 51 | Y | B | 0.0000 | |
| 52 | F | B | 0.2992 | |
| 53 | V | B | 0.0000 | |
| 54 | M | B | 0.8499 | |
| 55 | I | B | 0.0000 | |
| 56 | F | B | -0.5578 | |
| 57 | V | B | -2.0198 | |
| 58 | G | B | -2.2584 | |
| 59 | D | B | -2.6027 | |
| 60 | K | B | -2.5405 | |
| 61 | H | B | -1.4378 | |
| 62 | V | B | 0.0000 | |
| 63 | L | B | 1.2123 | |
| 64 | M | B | 0.0000 | |
| 65 | S | B | 0.5139 | |
| 66 | W | B | 0.6109 | |
| 67 | W | B | 0.9400 | |
| 68 | V | B | 0.0000 | |
| 69 | P | B | -0.3273 | |
| 70 | I | B | -0.0431 | |
| 71 | E | B | -1.8133 |