| Chain sequence(s) |
A: MSHHHHHHSGSEEEILQELKDILYQLETVTIYLLQYRLSVETGKPIEEFNDPKDERVIEEASKYFDEEFVEFLKEGPDAFIEKNPNDIQKLIDFLIPSLEKAIELARKLAEEVEPKHPPPEGHPSFSFIVTWLEDLLNKVKEIESLNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:32)
[INFO] Main: Simulation completed successfully. (00:05:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5517 | |
| 2 | S | A | -0.6344 | |
| 3 | H | A | -1.7575 | |
| 4 | H | A | -2.3714 | |
| 5 | H | A | -2.7761 | |
| 6 | H | A | -2.8081 | |
| 7 | H | A | -2.3643 | |
| 8 | H | A | -2.1113 | |
| 9 | S | A | -1.5690 | |
| 10 | G | A | -2.1454 | |
| 11 | S | A | -2.5847 | |
| 12 | E | A | -3.8810 | |
| 13 | E | A | -4.1993 | |
| 14 | E | A | -4.0158 | |
| 15 | I | A | -2.9460 | |
| 16 | L | A | 0.0000 | |
| 17 | Q | A | -3.6362 | |
| 18 | E | A | -3.2030 | |
| 19 | L | A | 0.0000 | |
| 20 | K | A | -1.8487 | |
| 21 | D | A | -1.7904 | |
| 22 | I | A | 0.0000 | |
| 23 | L | A | 0.0000 | |
| 24 | Y | A | -0.1209 | |
| 25 | Q | A | -0.3280 | |
| 26 | L | A | 0.0000 | |
| 27 | E | A | 0.0006 | |
| 28 | T | A | 0.0310 | |
| 29 | V | A | 0.0000 | |
| 30 | T | A | 0.0000 | |
| 31 | I | A | -0.3243 | |
| 32 | Y | A | -0.1988 | |
| 33 | L | A | 0.0000 | |
| 34 | L | A | 0.0000 | |
| 35 | Q | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.6415 | |
| 38 | L | A | 0.0000 | |
| 39 | S | A | -1.5229 | |
| 40 | V | A | -1.2477 | |
| 41 | E | A | -2.0006 | |
| 42 | T | A | -1.4189 | |
| 43 | G | A | -1.4496 | |
| 44 | K | A | -2.2234 | |
| 45 | P | A | -1.8815 | |
| 46 | I | A | -1.7962 | |
| 47 | E | A | -3.2860 | |
| 48 | E | A | -3.1808 | |
| 49 | F | A | 0.0000 | |
| 50 | N | A | -3.3102 | |
| 51 | D | A | -3.8192 | |
| 52 | P | A | -2.7989 | |
| 53 | K | A | -3.6084 | |
| 54 | D | A | -3.3806 | |
| 55 | E | A | -3.4246 | |
| 56 | R | A | -2.6136 | |
| 57 | V | A | 0.0000 | |
| 58 | I | A | -2.7815 | |
| 59 | E | A | -2.8872 | |
| 60 | E | A | 0.0000 | |
| 61 | A | A | 0.0000 | |
| 62 | S | A | -2.5952 | |
| 63 | K | A | -2.2429 | |
| 64 | Y | A | -1.7122 | |
| 65 | F | A | 0.0000 | |
| 66 | D | A | -3.0997 | |
| 67 | E | A | -3.5839 | |
| 68 | E | A | -3.2867 | |
| 69 | F | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | E | A | -3.6590 | |
| 72 | F | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | K | A | -3.1234 | |
| 75 | E | A | -3.0909 | |
| 76 | G | A | -1.9616 | |
| 77 | P | A | 0.0000 | |
| 78 | D | A | -2.7338 | |
| 79 | A | A | -2.5175 | |
| 80 | F | A | 0.0000 | |
| 81 | I | A | -2.4900 | |
| 82 | E | A | -3.4182 | |
| 83 | K | A | -3.1410 | |
| 84 | N | A | -2.5726 | |
| 85 | P | A | -2.4350 | |
| 86 | N | A | -3.0241 | |
| 87 | D | A | -2.4977 | |
| 88 | I | A | -2.2753 | |
| 89 | Q | A | -2.3096 | |
| 90 | K | A | -2.1772 | |
| 91 | L | A | 0.0000 | |
| 92 | I | A | 0.0000 | |
| 93 | D | A | -2.2857 | |
| 94 | F | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | I | A | -1.1354 | |
| 97 | P | A | -1.0680 | |
| 98 | S | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | E | A | -2.0448 | |
| 101 | K | A | -2.1625 | |
| 102 | A | A | 0.0000 | |
| 103 | I | A | -2.1948 | |
| 104 | E | A | -3.0705 | |
| 105 | L | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | R | A | -3.4921 | |
| 108 | K | A | -3.2409 | |
| 109 | L | A | 0.0000 | |
| 110 | A | A | -2.7188 | |
| 111 | E | A | -3.7227 | |
| 112 | E | A | -3.6072 | |
| 113 | V | A | -2.4603 | |
| 114 | E | A | -2.3585 | |
| 115 | P | A | -2.2129 | |
| 116 | K | A | -2.7378 | |
| 117 | H | A | -1.9474 | |
| 118 | P | A | -1.5280 | |
| 119 | P | A | -1.2973 | |
| 120 | P | A | -1.4608 | |
| 121 | E | A | -2.3245 | |
| 122 | G | A | -1.6526 | |
| 123 | H | A | -1.3993 | |
| 124 | P | A | -0.3498 | |
| 125 | S | A | -0.1541 | |
| 126 | F | A | 0.0000 | |
| 127 | S | A | -0.0635 | |
| 128 | F | A | 1.1627 | |
| 129 | I | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | T | A | -0.4992 | |
| 132 | W | A | -0.4908 | |
| 133 | L | A | 0.0000 | |
| 134 | E | A | -2.4985 | |
| 135 | D | A | -3.0802 | |
| 136 | L | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | N | A | -3.4816 | |
| 139 | K | A | -3.2902 | |
| 140 | V | A | 0.0000 | |
| 141 | K | A | -2.8280 | |
| 142 | E | A | -2.9415 | |
| 143 | I | A | 0.0000 | |
| 144 | E | A | -2.1146 | |
| 145 | S | A | -1.1085 | |
| 146 | L | A | 0.0066 | |
| 147 | N | A | -1.0925 | |
| 148 | S | A | -0.4998 |