| Chain sequence(s) |
A: MPCSCKKYCDPWEVIDGSCGLFNSKYICCREK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0100 | |
| 2 | P | A | 0.1418 | |
| 3 | C | A | -0.0226 | |
| 4 | S | A | 0.1595 | |
| 5 | C | A | -0.5154 | |
| 6 | K | A | -1.8605 | |
| 7 | K | A | -2.0023 | |
| 8 | Y | A | 0.3445 | |
| 9 | C | A | 0.5042 | |
| 10 | D | A | -0.2088 | |
| 11 | P | A | 0.1019 | |
| 12 | W | A | 0.1469 | |
| 13 | E | A | -0.2640 | |
| 14 | V | A | 0.9503 | |
| 15 | I | A | 1.1239 | |
| 16 | D | A | -0.6911 | |
| 17 | G | A | -0.3060 | |
| 18 | S | A | -0.6048 | |
| 19 | C | A | -0.7543 | |
| 20 | G | A | -0.3071 | |
| 21 | L | A | 1.5987 | |
| 22 | F | A | 1.6820 | |
| 23 | N | A | -0.4849 | |
| 24 | S | A | -0.9322 | |
| 25 | K | A | -1.7975 | |
| 26 | Y | A | -0.6617 | |
| 27 | I | A | 0.0347 | |
| 28 | C | A | 0.0000 | |
| 29 | C | A | -0.5776 | |
| 30 | R | A | -1.9341 | |
| 31 | E | A | -2.6321 | |
| 32 | K | A | -2.6407 |