Project name: SGHKGHK4

Status: done

Started: 2026-05-21 14:43:42
Settings
Chain sequence(s) A: SGHKGHK
C: SGHKGHK
B: SGHKGHK
D: SGHKGHK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-4.4598
Maximal score value
0.0
Average score
-3.0673
Total score value
-85.8834

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.6462
2 G A -2.2389
3 H A -3.2708
4 K A -4.2451
5 G A -3.7021
6 H A -4.2602
7 K A -4.4598
1 S B -1.8107
2 G B 0.0000
3 H B -2.7788
4 K B -4.1825
5 G B -3.7894
6 H B -4.0670
7 K B -4.2234
1 S C -1.7923
2 G C -1.9267
3 H C -2.8333
4 K C -3.4483
5 G C -3.4302
6 H C -3.5377
7 K C -3.6352
1 S D -1.6006
2 G D -2.3396
3 H D -3.1456
4 K D -3.9284
5 G D -2.8118
6 H D -3.5369
7 K D -3.2419
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Laboratory of Theory of Biopolymers 2018